Gene Htur_1762 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHtur_1762 
Symbol 
ID8742356 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaloterrigena turkmenica DSM 5511 
KingdomArchaea 
Replicon accessionNC_013743 
Strand- 
Start bp1833987 
End bp1834658 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content64% 
IMG OID646512340 
ProductBacterio-opsin activator HTH domain protein 
Protein accessionYP_003403320 
Protein GI284165041 
COG category[R] General function prediction only 
COG ID[COG3413] Predicted DNA binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTCAGG CGACACTCAC TATCACGATG CCCGAACAGA TCTGGATACA GCAGCTCTCG 
ACGGCGTATC CGGGGGCGAC CTTTCGGGTA CTGGCGGCCG TTCCCGGCTC CGATACGGGA 
TTCGCGCTCG TCCGCATCGC CGGTTCCGAC GTCGCGGACA TCGTCGAGGA CATGCGCGAT 
CACGACCAGA TCACTGAACT CTCTCTCGCC CAGTACAGCG ACAACGAGGT GACGGTCCAC 
TTCGAGACGA CGGCCCCGCT GTTGCTGTTC TCCTCGCGGG ACTCGGGGAT GCCGATTGAA 
CTCCCCGTCG AGATCGTCGA CGGTGAGGCG ACCATCGAGG TGACCGGCTC GCGAGACCGG 
CTGGCCGAAC TCGCCGAACA GCTCGAGCAC TTCGGGCTGC AGTACCGGAT CGAACACGTC 
CGCGAGCGGC TCCACGAGAG CCAACTGCTC TCGGATCGCC AGCTCGAGGT GGTCGTCGCC 
GCCGTCGACG AGGGCTACTA CGACACCCCC CGAGAGTCCT CGTTGACGGA ACTCGCCGAA 
CAGCTGGGTA TCGCGAAGTC GACCTGTAGC GAGACCCTCC ACCGGGCGGA GGAGGCGATC 
ATCAAGCGAT TCGTCGAAGA TCTGCCGGGC GTCGAGGGGG ACTCCCTCGA GGAACAACTC 
GCGACGCGTT AG
 
Protein sequence
MAQATLTITM PEQIWIQQLS TAYPGATFRV LAAVPGSDTG FALVRIAGSD VADIVEDMRD 
HDQITELSLA QYSDNEVTVH FETTAPLLLF SSRDSGMPIE LPVEIVDGEA TIEVTGSRDR 
LAELAEQLEH FGLQYRIEHV RERLHESQLL SDRQLEVVVA AVDEGYYDTP RESSLTELAE 
QLGIAKSTCS ETLHRAEEAI IKRFVEDLPG VEGDSLEEQL ATR