| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Htur_1708 |
|---|
| Symbol | |
|---|
| ID | 8742302 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haloterrigena turkmenica DSM 5511 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013743 |
|---|
| Strand | + |
|---|
| Start bp | 1775935 |
|---|
| End bp | 1776660 |
|---|
| Gene Length | 726 bp |
|---|
| Protein Length | 241 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 646512286 |
|---|
| Product | Ribosome maturation protein SBDS-like protein |
|---|
| Protein accession | YP_003403266 |
|---|
| Protein GI | 284164987 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1500] Predicted exosome subunit |
|---|
| TIGRFAM ID | [TIGR00291] rRNA metabolism protein, SBDS family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATATCGC TCGACGAGGC GGTGACGGCG CGACTCGAGT CACACGGGGC GCGCTTCGAA
GTGCTCGTAG ACCCGGACGC GGCACTGGCG ATCAAACGCG ACGAGTTCGA CGGCGAACTC
GAGGACGTGA TCGCCGCCGA GGACGTCTTC GAGGACGCCT CGCGGGGCGA CCGACCCGCC
GAGGACGACC TCGAGACGGT CTTCGACACG ACCGATCCCC TCGAAATCAT CCCCGAGGTG
ATCAAGGAGG GAGAGATCCA GATCACGGCC GATCAGCGCC GCGAGATGCA AGAACAGAAA
CGAAAGCAGT TGATCGACAC CATCGCGCGC AACGCGGTCA ACCCGCAGAT GGACAACGCG
CCCCATCCCC CAGAGCGCAT CGAGAACGCC CTGGAGCAGG CCGGGTTTAC AGTCGATCCG
ATGGAACCCG TCGAGAGCCA GGTCGACGAC GCGCTCGACG ATCTGCGGCC CGTGATCCCG
ATCCGCTTCG AGGAGGTGAC GATCGCCGTG CAGATTCCCG CCGAGTACGC CGGCAGCGCG
CAAGCGCAGG TCCGCCAGTT CGGCGACTTA GAGCGCGAGG AGTGGCAGGC CGACGGCTCG
TGGGTCGGCG TCATCACCTT CCCCGCGGGG ATGCAAAACG ACTTCTACGA CGTCGTCAAC
GAACACTCCA GCGGCGAGGC CGAGACGGAG ATCATCAAGG ACAAGGACGA CCTGAAGACG
CGGTAG
|
|---|
| Protein sequence | MISLDEAVTA RLESHGARFE VLVDPDAALA IKRDEFDGEL EDVIAAEDVF EDASRGDRPA
EDDLETVFDT TDPLEIIPEV IKEGEIQITA DQRREMQEQK RKQLIDTIAR NAVNPQMDNA
PHPPERIENA LEQAGFTVDP MEPVESQVDD ALDDLRPVIP IRFEEVTIAV QIPAEYAGSA
QAQVRQFGDL EREEWQADGS WVGVITFPAG MQNDFYDVVN EHSSGEAETE IIKDKDDLKT
R
|
|---|
| |