| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Htur_1623 |
|---|
| Symbol | |
|---|
| ID | 8742216 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haloterrigena turkmenica DSM 5511 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013743 |
|---|
| Strand | + |
|---|
| Start bp | 1682014 |
|---|
| End bp | 1683783 |
|---|
| Gene Length | 1770 bp |
|---|
| Protein Length | 589 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 646512201 |
|---|
| Product | TraB determinant protein |
|---|
| Protein accession | YP_003403182 |
|---|
| Protein GI | 284164903 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1916] Uncharacterized homolog of PrgY (pheromone shutdown protein) |
|---|
| TIGRFAM ID | [TIGR00261] pheromone shutdown-related protein TraB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGATG CAGGTGACGC CGATGTGCCG GCGCCCCCCG ACCCACCGGA CGACGACCAG
GGCACCGTCA CCGTCCTCGG GACAGCCCAT GTCTCGCAGT CGAGCGTCGA CGAGGTCCAC
GAAACGATCG ATCGCGAGCA ACCGGACGTC GTCGCCGTCG AACTGGACGA AAACCGGTAC
CGCCAGATGC AGGGCGGTGC GCCGGACGAC ATCGAGGCGG GCGACCTCCT CTCGGGGAAC
ACCGTCTTCC AGTTTCTGGC CTACTGGATG CTTTCCTACG TCCAGTCGCG GCTCGGCGAC
CAGTTCGACA TCGAACCCGG CGCGGACATG CGCGCCGCCA TCGAGGCCGC CGAACGCAAC
GGGAGCGGCG TCGCGCTGGT CGACCGAGAC ATCCAGGTGA CGATCCAGCG GTTCTGGCGC
GGGCTCTCGA TCACCGAGAA GCTGAAGATG GTCGGCGGGC TCGCGCTGGG GGTCACCGAT
CCCCGAACCA TCGGGCTCTC CTTCGGCGCC ATCGGCGGCG CCCTCCTCGG GCTCCTCTTC
GGCGCGTTCC TCGCCCCGCT GCTCGGACTG GGCGACACCC TGTTGCTCGG CATCACCGGC
TCGACGACGC TGGCGGCCGC CGGCGCCGTC ACCGCCGGTT CATTCGGCGG CGCCCTCGTC
GGCCTCCTCT TTCTCCCCTC GCTCGAGTCG GTCGGGAGAT CGAACGGCAT CGCCGGCGGG
TTCACGATAC GGATCCTCGC CGGGATCGGA CTCGGAATCG CTGCCTGCCT CGCGCTCGTC
GCGGCGGAGG TCTCCGTCGG GCCGTTCTCC GCGGGGGCCT TCGAGAGCGT CGGTACCTAC
GCGGTCCGCG GGACGGTCGG TCTGTTGGCC GGCCTCGGCG TCGGCGTTCT CGTCGGCGCC
GTCGTCGGGC TCTTCCTCGA CGGCGTCAGC GGCGACGTCG ACGAGATCGA CGAAGTCGAC
ATCGAGGAGA TGACCGACGG CGACGTCGTC GCGGCGATGA TGGAGGAGTT TCGTCAGTTC
AGCCCGCGCG GCGCCAACGC CCTGATCGAC GAACGCGACG CCTACATCGC CACCCACCTT
CACCAACTCC GCGAGCAGGG GTACGACGTG CTCGCCGTCG TCGGCGCCGG GCACAAGGCC
GGCATCGAGC GCCACCTCGA GAACCCGTCG GAAATCCCCT CCCTCGAATC GCTGTCGGGG
ACGACCTCGA GCAGCCGGTT CTCGCCGCTG AAGATCGTCG GCTACCTGCT GACGCTCGGC
TTCGTCGCCT TCTTCTTCCT GCTGGTCATG GCCGGCGTTC AGGACACCTT CCTGCTCCAG
TTGTTCGGGG CGTGGTTCCT GATCAACGGG ATCTTCGCGT TCACGCTCGC TCGTCTCGCC
GGAGCGCGCT GGATCAGCGC GGGCGTCGGC GGAGCCGTCG CCTGGCTGAC GAGCATCAAT
CCGCTGCTGG CTCCGGGCTG GTTCGCCGGC TACGTCGAAC TCAAATACCG GCCGGTCAAC
GTCCGGGACA TCCAGACGCT AAACGAGATC ATCGACGACA CCGAGCGCCC GATCGAGGAG
GCCTTCGCCG ACATGTTCGA GGTGCCGCTG TTCCGGCTCA TCATGATCGT CGCGCTGACC
AACATCGGGA GCATGATCGC GAGCTTCCTG TTCGTGGTCG GCGTGTTGCC GTGGCTGGCG
CCCGAAATCG GCGGTATCAA CGCCCTGTTC GATGAACTCT TCCGCGGGGC CGAGAACACG
CTCGAGTTGC TCCGGGGGCT GTTGACATGA
|
|---|
| Protein sequence | MSDAGDADVP APPDPPDDDQ GTVTVLGTAH VSQSSVDEVH ETIDREQPDV VAVELDENRY
RQMQGGAPDD IEAGDLLSGN TVFQFLAYWM LSYVQSRLGD QFDIEPGADM RAAIEAAERN
GSGVALVDRD IQVTIQRFWR GLSITEKLKM VGGLALGVTD PRTIGLSFGA IGGALLGLLF
GAFLAPLLGL GDTLLLGITG STTLAAAGAV TAGSFGGALV GLLFLPSLES VGRSNGIAGG
FTIRILAGIG LGIAACLALV AAEVSVGPFS AGAFESVGTY AVRGTVGLLA GLGVGVLVGA
VVGLFLDGVS GDVDEIDEVD IEEMTDGDVV AAMMEEFRQF SPRGANALID ERDAYIATHL
HQLREQGYDV LAVVGAGHKA GIERHLENPS EIPSLESLSG TTSSSRFSPL KIVGYLLTLG
FVAFFFLLVM AGVQDTFLLQ LFGAWFLING IFAFTLARLA GARWISAGVG GAVAWLTSIN
PLLAPGWFAG YVELKYRPVN VRDIQTLNEI IDDTERPIEE AFADMFEVPL FRLIMIVALT
NIGSMIASFL FVVGVLPWLA PEIGGINALF DELFRGAENT LELLRGLLT
|
|---|
| |