Gene Htur_1561 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHtur_1561 
Symbol 
ID8742152 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaloterrigena turkmenica DSM 5511 
KingdomArchaea 
Replicon accessionNC_013743 
Strand+ 
Start bp1621124 
End bp1622005 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content68% 
IMG OID646512137 
Producturea ABC transporter, permease protein UrtB 
Protein accessionYP_003403120 
Protein GI284164841 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0559] Branched-chain amino acid ABC-type transport system, permease components 
TIGRFAM ID[TIGR03622] urea ABC transporter, permease protein UrtB 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCGACAC CGGAACTCCT GAACCTCGGC TTCGAGTTCG TCGAGATCTT CGCCTTCATC 
GTCCTCGCGA CGGTGGGACT GGCGGTGATC TTCGGCATGA TGGGGATCAT CAACCTCGCC 
CACGGCGAGT TCATCCTCGT CGGCGCCTAC GCGACCTCCT TCGCCGTCGC CGCCGGCCTG 
CCGCTGGCGG TCGCGATGGC CGTCGGCGTC GTCGCGACGG CCGCCTTCGG GCTCGTCCTC 
GAGCGGCTGA TCATCCGCCG GCTCTACGGC CGGCTGCTCG ATTCGATGGT CGTCACGTGG 
GGGATCAGCC TCGTGATGAT CCAGCTAACC CGGATCGCCT TCGGCAACAC CGCGCCCGGC 
GTGGGGATCC CGTTCGGCCA GCTCCCGGTC GTCGACGGGC CGGTCTACTA CCTCGTGCTC 
GCGGTCGTCG CGGTCGGCGT GCTCGGCGGG CTGTACGCGC TGTTCACGTG GACCGACTTC 
GGCGTCCGCG CACGCGCGAC GATGCAAGAC GAGGAGACCG CCCGCAGCAT GGGCGTCGAC 
ACCGACCAGA TGTACATGTC GACGTTCGCC ATCGGCTCCG GGCTCGCCGG ACTGGCTGGC 
GCGCTGTACG CGCCCGTGAT GACCGTCACG CCCGAGTACG GGACCAGCTT CCTCGTCGAG 
TCGTTCGTCG CCGTCGTCGT CGGCGGCTCC TCGGTCCTCC TCGGGACGAT CCTCGCAAGC 
GGGTTCCTCG GCACGGTCAA CGCCGCGTTC ACGAACATCG CCGGGACCTT CATGGGACAG 
GTCGCGATGC TGGTCGCCGC CATCGTCGCC ATCCGTCTGA TGCCCGACGG GATCACCGGG 
CTGCTGTCCG ATCTCCGCGA GAAGTGGGGT GAGAGCGAAT GA
 
Protein sequence
MATPELLNLG FEFVEIFAFI VLATVGLAVI FGMMGIINLA HGEFILVGAY ATSFAVAAGL 
PLAVAMAVGV VATAAFGLVL ERLIIRRLYG RLLDSMVVTW GISLVMIQLT RIAFGNTAPG 
VGIPFGQLPV VDGPVYYLVL AVVAVGVLGG LYALFTWTDF GVRARATMQD EETARSMGVD 
TDQMYMSTFA IGSGLAGLAG ALYAPVMTVT PEYGTSFLVE SFVAVVVGGS SVLLGTILAS 
GFLGTVNAAF TNIAGTFMGQ VAMLVAAIVA IRLMPDGITG LLSDLREKWG ESE