Gene Htur_1547 details

Gene Information

• Locus tag: Htur_1547
• ID: 8742138
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Haloterrigena turkmenica DSM 5511
• Kingdom: Archaea
• Replicon accession: NC_013743
• Strand: +
• Start bp: 1607055
• End bp: 1608986
• Gene Length: 1932 bp
• Protein Length: 643 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 646512123
• Product: ABC-type Na+ efflux pump permease component- like protein
• Protein accession: YP_003403106
• Protein GI: 284164827
• COG category: [C] Energy production and conversion; [P] Inorganic ion transport and metabolism
• COG ID: [COG1668] ABC-type Na+ efflux pump, permease component

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAGCGACG AGGCGGACCC CGATTCGGAC CGTCGGTCGC GGCGTCGTCG ACTCCGCGGT 
GCGCTGGCGC GGACGGCTCG GATCGCCCGC TGGGAGGTCT CTCGGAGCGC CGGCACCGTC 
GATCGGAAGA CGGTGCTCGT GCTGGCGGCG CTGGCGCTCG TCGTCGGCGT CGTCGGCTTT 
TCGGCCGCCG GCGAGGGGCT CGGCCTCGAG GACGAGATCT ACGTCGTCGC GGTCGACGAG 
GACAGCCGGT ACCACGACGT CGCCGTCGAG AGCGAGGCGT TCAGACCGAT GCCCCTCGAC 
GAGCTCGTGA TCGAGAACGG GGACGACGCC AACGCCGACG TGGTACTGAC GCGAAACGGC 
GAACTCGCCC ACTACGGCCC CCACGGGGAG GCCGCCCACG ACGCGTTCAT CGATGCGATC 
GACTCGTACA ACGAGCAGCG GTTGCGCCAA GAGGCCAATC AGACGGCGGC CTATCCGGTC 
CACGTCGAAC TCGACTACCA GAAGCGCGAT TTCGACGGAT CGGCGGAGCC GGACGAAAGC 
GACGGGGCGT CGAGCGACGG CTCGGACGAC GGGACGGACG CCGGCTCCGG AACCGGGACC 
GAGACGACCG ACGGGTCCGG CGGCGAGGAC TCGAGCGACG GCGGCTCCGG CGACGATACC 
ACCAGTGGAG GCGCTACCGG TGGGGACGCC GACGGTAGCG GTCAGAGCGA CGGGACCGAC 
GATAGCGGTG ACGGTCGACT GCAGGTGCCG AACGTCGGCG CCAGCGGCGC AGTCGACGGG 
ACGTCCGGAC CGCCGGGATC GATCTCGCCG CCGTTTCCCT TCCAGTCGCT CCTGTTGGCG 
TTCCTCTTCG TCGTCCCGAT GAACTTCGTC ATTCAGGCCT ACGGGAGCAC GATCATGGAC 
GAGCGGGTCA AGCGCCGCGG CGAACTGCTG CTCGTCTCGC CGGCCTCGAG ACGCGAAATC 
GTTGCCGGGA AGACGCTGCC CTACCTGCTG GGGCTGATCG CCGTCGCGGT CGGGATCACC 
GTCGCGGTTC AGGGTGGCCT CCTCTCGATC GCCGCGGCGA TTCCCATCGC GCTGCTGTTC 
CTCGCGGCGA CGTTCGCCGG CGCGATGCTC GCCCGCTCGT ACAAGGAACT GACGTTCGTG 
ACGGTCACGA TCAGCGTCTT CCTCACGACA TACACGTTCA TCCCGGCGGT GTTCGCCGAC 
GTGAACCCGA TCGCGCTGAT CTCGCCGCTG ACGCTGATCG TGACGAATCT GCAGGGCGAG 
TCGGTCTCCC TCGGGGAGTA CGTCTTCTCG ACCGCGCCGT TCTACTGCAG TGCCGCGGTC 
TGTTTCCTGC TCGGAATCGG CGTCTACCGC GAGGAGGACA TGTTCGCCCA GAAGGCGCTC 
CCGGCGAAGG TGCTCGACGC GATCGCGAGC CGCCTCCATA GCTATCGGAG CGTCGCCGTC 
CTGACGATGC TGTTCATCCC CTTCGTTTTC GCCGGCCAGT TGCTCGCCGT CGCTGTGCTG 
TTCGCCGTCC CCGAGCAACT CGCCGTGCCG ATCGTCATCG TCCTCGCGGC GGCCATCGAG 
GAGGTCGCCA AGAGCGTCCA CGTCTACGCC GGCTTCGTCC GCTCGCGGTT CGACGCCTCG 
CTTCGCGTCG CCGCCGTCCT CGGCGTCTGC TCCGGCGCCG GCTTCTTCCT CGGCGAGAAG 
GTCACCCACG TCGTCCAGTT CGTCGGCCTC CCCGAGCTGA CCGTCGGCGC CGCCGCGTTC 
GGTCCCGACC CCTCTGGGGG ACCGCTCGTG CTCGTCGCGG TCTTCCTCGC GCCGCTGGTC 
TTGCACGTCG TGACGGCCGT GATATCGGCG ATCGGCGCGA GTCGCGGGCC GAACGCGTAC 
TCCGTCGGAT TCCTGATCGC GACGCTCGTT CACGCGGGCT ACAACCTGGG GGTGATCGCC 
CTTGTCGCGT GA 

 

Protein sequence

MSDEADPDSD RRSRRRRLRG ALARTARIAR WEVSRSAGTV DRKTVLVLAA LALVVGVVGF 
SAAGEGLGLE DEIYVVAVDE DSRYHDVAVE SEAFRPMPLD ELVIENGDDA NADVVLTRNG 
ELAHYGPHGE AAHDAFIDAI DSYNEQRLRQ EANQTAAYPV HVELDYQKRD FDGSAEPDES 
DGASSDGSDD GTDAGSGTGT ETTDGSGGED SSDGGSGDDT TSGGATGGDA DGSGQSDGTD 
DSGDGRLQVP NVGASGAVDG TSGPPGSISP PFPFQSLLLA FLFVVPMNFV IQAYGSTIMD 
ERVKRRGELL LVSPASRREI VAGKTLPYLL GLIAVAVGIT VAVQGGLLSI AAAIPIALLF 
LAATFAGAML ARSYKELTFV TVTISVFLTT YTFIPAVFAD VNPIALISPL TLIVTNLQGE 
SVSLGEYVFS TAPFYCSAAV CFLLGIGVYR EEDMFAQKAL PAKVLDAIAS RLHSYRSVAV 
LTMLFIPFVF AGQLLAVAVL FAVPEQLAVP IVIVLAAAIE EVAKSVHVYA GFVRSRFDAS 
LRVAAVLGVC SGAGFFLGEK VTHVVQFVGL PELTVGAAAF GPDPSGGPLV LVAVFLAPLV 
LHVVTAVISA IGASRGPNAY SVGFLIATLV HAGYNLGVIA LVA