Gene Htur_1537 details

Gene Information

• Locus tag: Htur_1537
• ID: 8742128
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Haloterrigena turkmenica DSM 5511
• Kingdom: Archaea
• Replicon accession: NC_013743
• Strand: +
• Start bp: 1594136
• End bp: 1596046
• Gene Length: 1911 bp
• Protein Length: 636 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 646512113
• Product: putative PAS/PAC sensor protein
• Protein accession: YP_003403096
• Protein GI: 284164817
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG0642] Signal transduction histidine kinase
• TIGRFAM ID: [TIGR00229] PAS domain S-box

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGACGCTGC GATCCGTACC GATCGTCGAC CGAGTGACCG ACGCCTTCTT CGCGCTCGAT 
ACGGACTTTC GGTTCACGTA CGTAAACGAG CGCGCCGAGA CGCTGCTGAA ACGCTCCCGC 
GAGGAGCTGA TCGGCCGGGT CATGTGGGAC GAGTTCCCCC AGACCGTCGA GACGCAGTTC 
CCCGACGGCT TCCACCGGGC GATGGACGAA CAGGTCCCCG TCTCCTTCGA GATCTACCAC 
GCGCAACTGG AGACCTGGTT CGAGGCGCGG GCCTACCCCT CCGAGAGCGG CCTCTCGGTC 
TACATGCGCG ACGTCACCGA CCGGAAGGTC CAGGAGACGA CCCTGGCCCA ACACGCCGCC 
GTCGTCGAGG CCGTCAACGA CGCCGTCGTC ACCCTCGATC GGTCCCGAGA GATCGTCACT 
GTCAATGACG CCACCGAGAC GGCCCTCGGC ATCGACCGCG CGGAGCTGGT CGGCGAACAC 
GTCGAACGGC TCATCGACTG CGCGGGGATC GCCGCCGAGG ACGCCGTCGA GATCGGCCGC 
GCGATCACCG ATATCGACAT CGGCAGCGCG GTCGAGCGAA CGCTCGAGGT CCCGTTTACC 
GACGCCGACG GTATCGATCG GATCGGCGAG TTCCGCTTCG TTCCGATCGA GGACGACGTC 
GCGACCGTCG CCGCCGTGAT CCGCGACGTC ACCGACCGCC GCGAGTACGA GCGCGTCGTC 
ACGTCGCTCC ACGAGGTGAC TCGCTGGCTG CTCGAGTCCG ACGACCCCGA GGAGATCTGT 
GCGATCGCGG TTCACTCCGG GAGCGACCTG CTCGAGCTGC CGATCAGCGG CGTCTGGCTG 
TTAGAGGAGG AACACGGCTA TCTCGACCCC GTCGCCGGGA CCGCAGGGGC CCACGACGAG 
TTCGGCGGCC TCCCCCGATT CAACCCGGGC GAGGGGCTCG TCTGGGACGT CTTCGAGTCC 
GGCGACGTCG AGCGGTTCGA CGACCTCCGG GAGGTCGAAG ACATTTACAA CCCCGACACG 
CCGATCCGGT CGGAGATCAT CGCACCGATC GGCACCCACG GCGTCCTCAT GACCGGCTCG 
CTCGAGCCCC ACCGGTTCGA CGAGACCGAC GTCGACCTCA TCTCGACGCT TGTCGAGAAC 
ACCCGCGCGG CCCTCGACCG GGCCGACCGG GAGCAGGTCC TCCGGGAGCG GACCGCCGAA 
CTCGAGCGCC AGACCGAACG CCTCGAGTCG GTCGCGAACG TCCTCTCGAG CGATCTCAAA 
GCCCAGCTGT CGACCGTCGC CGACGCCCTC GAGAGCGACG GCTCCCGCAC CGGCACCGAC 
GGTGAAACCC ACGAGGAGTG GGAGTTCCCG CTCGCCGAGG ACTCCGTCGA AGCGACGCTC 
GACCGGGCCG AAGGGCTCGT CGACGACATC CGCGAGTTCG CCCGCAACGC CTCGACCGTC 
GGCACCCGCA GCCGGATCAC CCTCGAGTCA GCGATCGACG AGGCGCTGGA GCGCTCCCGG 
CTCGATTACG ACTCGGTCGT CGTCGAGGAG CCGGCGACGC TGCGGGCCGA CCCCGACCGG 
TTCGTCCACC TCCTCGAGAC GGCGTTCGAC GACGCCGCGG CCCGTGCCGA CAGCGAGGTG 
ACGATCCAGG TGGGGCTCGT CGGCTTCGAG AACGACGATC GCTCCCGCGG CTTCTTCCTG 
CACGACGACG CCGCCGAGAT CCCGCCGGCC GCTCACGAGC GGGTCCTCGA TCCGACGACC 
GGTCCCGACG GCGTCGAGAC CGGCGACGCG GTCGCGACCG ACGGGCTGGG GCTGGCCCTC 
GTTCGAGCGA TCGCCGAAGC CCACGACTGG GAGCTGTCGA TCGACAACGG CGAAAACGGC 
GGCACGCGAC TCGAGGTTCG GGACGTGACG ACCCTCGAGC GCGACTCCTG A 

 

Protein sequence

MTLRSVPIVD RVTDAFFALD TDFRFTYVNE RAETLLKRSR EELIGRVMWD EFPQTVETQF 
PDGFHRAMDE QVPVSFEIYH AQLETWFEAR AYPSESGLSV YMRDVTDRKV QETTLAQHAA 
VVEAVNDAVV TLDRSREIVT VNDATETALG IDRAELVGEH VERLIDCAGI AAEDAVEIGR 
AITDIDIGSA VERTLEVPFT DADGIDRIGE FRFVPIEDDV ATVAAVIRDV TDRREYERVV 
TSLHEVTRWL LESDDPEEIC AIAVHSGSDL LELPISGVWL LEEEHGYLDP VAGTAGAHDE 
FGGLPRFNPG EGLVWDVFES GDVERFDDLR EVEDIYNPDT PIRSEIIAPI GTHGVLMTGS 
LEPHRFDETD VDLISTLVEN TRAALDRADR EQVLRERTAE LERQTERLES VANVLSSDLK 
AQLSTVADAL ESDGSRTGTD GETHEEWEFP LAEDSVEATL DRAEGLVDDI REFARNASTV 
GTRSRITLES AIDEALERSR LDYDSVVVEE PATLRADPDR FVHLLETAFD DAAARADSEV 
TIQVGLVGFE NDDRSRGFFL HDDAAEIPPA AHERVLDPTT GPDGVETGDA VATDGLGLAL 
VRAIAEAHDW ELSIDNGENG GTRLEVRDVT TLERDS