Gene Htur_1415 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHtur_1415 
Symbol 
ID8742006 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaloterrigena turkmenica DSM 5511 
KingdomArchaea 
Replicon accessionNC_013743 
Strand- 
Start bp1470298 
End bp1470948 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content63% 
IMG OID646511993 
ProductBacterio-opsin activator HTH domain protein 
Protein accessionYP_003402976 
Protein GI284164697 
COG category[R] General function prediction only 
COG ID[COG3413] Predicted DNA binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAAGC TCCGGCGGGA GCTGGACGAC GTCCGGAGCA TCGAGCTCGA CAACGCGTTC 
TACGTCGAAG ACGGGACGTG GATCGAGTCT CTGACCGTCA CGTCGAACGC CGAGTTCGAT 
CCGGAAGCCG TCGTCGAGGA GATCTCCGGC GTGTCGCTGT TCTACGATAG CGAGATCCCG 
ACCGCGTCGG ACGACCTCGA GATTCGCCGG CTGACGATCC TGGCCAACGA ATCGTATCCG 
TTCATCCTGA GTCTCGTCCT GCGACAGGAG GCGATTCCGA ACCGGATCGT CCTCCAGAAC 
GACGATTTCG AGGCCGTGGT GACGACCCGC GACTGGGATC AGTTCCGGGC GATGGCCGAC 
GAGGTCCAGG AGACCCTCGG CGAGTTCGAA CTGCTGTCGG TCACCCAGAA CGAGGACCCC 
GGCGAACCGC TCGACAGCGG ACGATTGACC GAAGTCCTCG TCTCGAAGCT CACCGACGAG 
CAGTTGGCAG TCCTCGAGAC GGCTTACGAG AACGGCTACT TCGACATCCC GCGAGAGACG 
TCGGCGACCG AACTCGCCGA CGAACTCGAG ATCGCGCAGT CGACGGCGAG CGAACGATTA 
CGGACCGCGG AGCGAACCCT CCTCGAACTC ATCTACGGTC CGCGAGAGTG A
 
Protein sequence
MAKLRRELDD VRSIELDNAF YVEDGTWIES LTVTSNAEFD PEAVVEEISG VSLFYDSEIP 
TASDDLEIRR LTILANESYP FILSLVLRQE AIPNRIVLQN DDFEAVVTTR DWDQFRAMAD 
EVQETLGEFE LLSVTQNEDP GEPLDSGRLT EVLVSKLTDE QLAVLETAYE NGYFDIPRET 
SATELADELE IAQSTASERL RTAERTLLEL IYGPRE