Gene Htur_1330 details

Gene Information

• Locus tag: Htur_1330
• ID: 8741920
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Haloterrigena turkmenica DSM 5511
• Kingdom: Archaea
• Replicon accession: NC_013743
• Strand: +
• Start bp: 1381030
• End bp: 1381752
• Gene Length: 723 bp
• Protein Length: 240 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 646511907
• Product: Bacterio-opsin activator HTH domain protein
• Protein accession: YP_003402891
• Protein GI: 284164612
• COG category: [R] General function prediction only
• COG ID: [COG3413] Predicted DNA binding protein

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATCGATC TCGATATCGA CATGCGCCAG TACGACTGCC CGTTCATCGA TACGACCGAC 
GATGTCGAGA TCGCCTTCTC GGCCGTCCAG TGGCAACTCG ATACCGACGA CGAACAGCTC 
GAGACCCGAC TCATCGCGCG GGGGGAGTCG ACGGGCGCCC TCGAGGACGG GCTCCACGCG 
CTTCGGGACC ACCCGAACAT GCGCGAGTGT TACATCCTCT CGAAGCGGGA GAACGTCGCC 
GAGATCGGGA CGACGATCGA GGAGACCAAC GCGATGCGGA CGATCCAGCG AAACGGCGGC 
TACATCACCG GCCCCTTCCA CATCGAGGAC GGCCACGAGC GGTGGCACGT CGGCTTCGAC 
GACGACGCCG ACGAGGATCA CGCGTTGGCC GAACTCGAGC GCCACAACGA CTACACCGTC 
GCGGACCGCG ACCAGTTCGG CCCGACGGAA CTGTTCGACC TCCTCGAGAA TTCCGACAGC 
GCGCTCCGCC TGCTCGAGGG CTGTCGGTCG CTGACCGAGA CCGAACGAGA GACTTTCGAG 
ACGGCCGCCC GGGAGGGCTA CTACGAGACG CCACGGGCGA CGACCCTCGA GGAGCTCTCG 
AACCACTTCG ACGTCTCGAA GACGGCCGTC TCGATGAACC TCCGCCGGAG CGAACGCAAG 
GTCCTGCAGG CGGCGCTGTC GGCGCTCGAG AACATGGACG AGACGGTGAC GCAGACGCGC 
TGA 

 

Protein sequence

MIDLDIDMRQ YDCPFIDTTD DVEIAFSAVQ WQLDTDDEQL ETRLIARGES TGALEDGLHA 
LRDHPNMREC YILSKRENVA EIGTTIEETN AMRTIQRNGG YITGPFHIED GHERWHVGFD 
DDADEDHALA ELERHNDYTV ADRDQFGPTE LFDLLENSDS ALRLLEGCRS LTETERETFE 
TAAREGYYET PRATTLEELS NHFDVSKTAV SMNLRRSERK VLQAALSALE NMDETVTQTR