Gene Htur_1325 details

Gene Information

• Locus tag: Htur_1325
• ID: 8741915
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Haloterrigena turkmenica DSM 5511
• Kingdom: Archaea
• Replicon accession: NC_013743
• Strand: +
• Start bp: 1375453
• End bp: 1376154
• Gene Length: 702 bp
• Protein Length: 233 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 646511903
• Product: Bacterio-opsin activator HTH domain protein
• Protein accession: YP_003402887
• Protein GI: 284164608
• COG category: [R] General function prediction only
• COG ID: [COG3413] Predicted DNA binding protein

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTACTC AGGAACCGGT ATCGGAACCG GAGAGTTTCA CGCGGGTCGA ATTCTCCCTC 
TCGAACGCGG AGTATCCGTT CGTCGGTATC TCTACGATCG ACGGCTGCCG AGCCGCACTG 
GAGGAGATAC TCCCGCGCAG TGCGGGATCG TACGCCGAAT TCTTCGAGGT GAGCGGCGTC 
GAGTCCGAGC GCGTCCTCGA GATCGCGAGG ACCCACGAGT CGGCCGAACC GACGTTGCTC 
GACGAGTACG AATCGGAGAG CCTCTTCGAG TTTCGAGTGA GCCGTAACTG TCCCGCGGTC 
TTCCTGTGCG AGCGCGGAGC GTTACCGCGG GAAGTGTACA GCACCGACGG ACGTGGGCGT 
ATCAGCGCGG AGATACCGCC GTCGGAGGAC GCGGGAGAGA TCGTCGACGC GTTCCTCGAT 
TCGCATCCGG ACGCGGAGCT ACGGGCGAAG CGAGAGCAGT CGTCCGTCAC CCCGCTGTTC 
GGTCACCGAC AGTACAAACG GGTGCTGTCG GAGCGGCTCA CGGACCGCCA GCGAGAGGTA 
TTCACGGCGG CCTACGAGGC GGGATACTAC GAGTGGCCGC GCGAGATCAC GGCCGATGCA 
CTCGCGACGG AACTGGACAT TTCGACGTCG ACCCTGCTCG ATCACCTCCG ATCCGTCGAG 
CAGATGTTCG TCCGGCTGTT TTTCGAACCG ACGGACCGGT GA 

 

Protein sequence

MSTQEPVSEP ESFTRVEFSL SNAEYPFVGI STIDGCRAAL EEILPRSAGS YAEFFEVSGV 
ESERVLEIAR THESAEPTLL DEYESESLFE FRVSRNCPAV FLCERGALPR EVYSTDGRGR 
ISAEIPPSED AGEIVDAFLD SHPDAELRAK REQSSVTPLF GHRQYKRVLS ERLTDRQREV 
FTAAYEAGYY EWPREITADA LATELDISTS TLLDHLRSVE QMFVRLFFEP TDR