| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Htur_1262 |
|---|
| Symbol | |
|---|
| ID | 8741852 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haloterrigena turkmenica DSM 5511 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013743 |
|---|
| Strand | + |
|---|
| Start bp | 1320067 |
|---|
| End bp | 1321665 |
|---|
| Gene Length | 1599 bp |
|---|
| Protein Length | 532 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 646511841 |
|---|
| Product | putative PAS/PAC sensor protein |
|---|
| Protein accession | YP_003402825 |
|---|
| Protein GI | 284164546 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3413] Predicted DNA binding protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATGGGG TCCTCGACGG GGTCACCGAC GGCGTGCTCG TCGTCGACAC CGACTGGCGG
ATTACGACGG CCAACGCCGT CGCGGCGGAC CTGCTCGAGC GAGAGCGCGA CACCCTCGTC
GGGACCGATA TCAGGGACGT GTTCCCGCGA TCGTTCGCGG CGACGTTTCA CGAGCACTTC
GGCGGCGACG ATCCGGAGCC AGCCGAGATC ACCTTCGAGG AGTACTTCCC GGAGCTAGAC
GTCTGGCTGC GCGTTCGGAC GACGACGATC GGGGAGCGAC TCGCGGTCTA CTATCGAGAC
GTCACCGACC GGAAAGCCCT CGAGAGCGAC CTCGGGGATC GGGAGGCGGA ACTGGCCCGC
CTCGAGCGGA TTAACAACAT CGTCCAGAAG ATCATTCGGG ACCTCGTCGG GGCCACGACC
CGGGAGGAAG TCGAGGAACT CGTCTGTAAG CGGCTCGCGG AGACCGACCT GTACGAATTC
ACGGTGATCG GCGAGCGGGA GATGACGGGC GATCGGATCG TCTGTCGAAC CGCGGCCGGC
GAGCACGACG GGATTCTCGA TCTCATCGTC GAGAGCGGTG CCGACGCCGA CGGCTCGAGG
GGGCCGGAGT ACGCGACGCT GGAGACGGGG GAAACGCGAG TCGTCCGCCA TCTCGTGGAC
GACGAGTCGG TTCCGGAGTC GGTCCGCCGA GAAGCGTTCG CTCGTGGATT GCAGTCGAGC
ATCGTCGTTC CGCTTCGGTA CGGGGACACC ACCTACGGGG TGTTGAGCGT CTACGCACTC
GATCCGGACG CCTTCAGCGA GCGCGAACGG GAGAGCCTGG AAACGCTCGG CGTAACCACT
GGGTTCGTCA TCAACGCGAC TCGCCAGCGC AATCTGTTGC TCTCGGATAC GGTCATCGAA
CTCACGTTCC GTATCACCGA CGCCTTCTTC GCGACGGCGT CCGCGCAACT CGATTGCGAA
CTCGCGGTCG AAGGCATCGT CCCGTTAGAC GCTGCATCGT TACTCTGTTA CGTTCGCGTC
GACGGTGCCG AACCCGATGT GCTCCTCGAA CTGGCCGACG ATCGATCCGA CGTCGACGCC
GGTCGCGTGA TCCACGAGTC CGCGACCGAG ACCGGCGGAT TCACCGAGGT TACGGTGTCC
GGACGGTCGC CGATCCTCAC GTTAGCCACG TACGGCGCGA CCGTCAGAAC GGCAGAGTTC
GATCGCGGAA CCGGCCTGAT CGTCGCGGAA GTAGCGCCCA GCAGCGACAT CCGAGAAGTC
GTCGAGGCCG TCGGCGAGCG GTTTCCCAGA TCGGAACTAC TGTCGAAACT CGACCGCGAA
CGACCGATCG AAACGGTACA GGAGTTCCGG AGCGGGCTCC ACGACCGTCT GACCGACCGC
CAGCGAAACG CCCTCCAGAT GGCGTACTAC GGCGGGTACT TCGAATCGCC GCGAGACAGC
ACCGCCGAGG AACTCGCCGA GACGATCGGA ATCAGTTCGC CGACGCTCCA CCATCATCTC
CGGGCGGGGC AGCGGAAACT CCTCGACGCC TTCTTCGACG ACGCGGAGTG CGAACGGCCG
GTTGCGGTCG ACGACCACCA ACCGAGGCGA AACGAATGA
|
|---|
| Protein sequence | MDGVLDGVTD GVLVVDTDWR ITTANAVAAD LLERERDTLV GTDIRDVFPR SFAATFHEHF
GGDDPEPAEI TFEEYFPELD VWLRVRTTTI GERLAVYYRD VTDRKALESD LGDREAELAR
LERINNIVQK IIRDLVGATT REEVEELVCK RLAETDLYEF TVIGEREMTG DRIVCRTAAG
EHDGILDLIV ESGADADGSR GPEYATLETG ETRVVRHLVD DESVPESVRR EAFARGLQSS
IVVPLRYGDT TYGVLSVYAL DPDAFSERER ESLETLGVTT GFVINATRQR NLLLSDTVIE
LTFRITDAFF ATASAQLDCE LAVEGIVPLD AASLLCYVRV DGAEPDVLLE LADDRSDVDA
GRVIHESATE TGGFTEVTVS GRSPILTLAT YGATVRTAEF DRGTGLIVAE VAPSSDIREV
VEAVGERFPR SELLSKLDRE RPIETVQEFR SGLHDRLTDR QRNALQMAYY GGYFESPRDS
TAEELAETIG ISSPTLHHHL RAGQRKLLDA FFDDAECERP VAVDDHQPRR NE
|
|---|
| |