Gene Htur_1254 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHtur_1254 
Symbol 
ID8741844 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaloterrigena turkmenica DSM 5511 
KingdomArchaea 
Replicon accessionNC_013743 
Strand
Start bp1311468 
End bp1312688 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content66% 
IMG OID646511833 
Productorc1/cdc6 family replication initiation protein 
Protein accessionYP_003402817 
Protein GI284164538 
COG category[L] Replication, recombination and repair
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1474] Cdc6-related protein, AAA superfamily ATPase 
TIGRFAM ID[TIGR02928] orc1/cdc6 family replication initiation protein 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAAGT ACGACGACCT CTTCGCCGAG ACGGCGCCCG CCAACAGCGT CTTCGCCAAC 
AAACGCGCGC TGGACCCACT CGCCGACCCC GCCGAGATCG CCGCCCGCGA CAGCCAAGAA
CGCGCCCTCG CCACGCTCAT CAACGGCGTC CATGACGGCT ATCTGCCGCC GACGGTCTCG
ATCTACGGGC CGCCCGGCAC GGGGAAGACC CTGACGACGC GGCGGATCTG CCGGGAGTTC
GCCGCCCGCC ATGACGACGT TGCAGTGGAG TACGTCAACC TCAAGGAGTG TCGGACGCTG
TTCAGCGCGG CTAACGAAAT CCTGTTCGCG CTGACCGGCG CCAAGAAGGG CGCCTACGAG
GGGTTGGATG GGGTCTTTAC GGGCATTTGG ACGGCCCTTG AGGCCTACCC CGAGTGGACC
GTGCTGGTGC TCGACGAGAT CGACCACGTC CAGCACGACA CGAACTACGA TCCCAGCGAC
TTTTTCTACC GGCTGCTTCG GGGTGAGGGC CGGCTGTCCC GCGGGATCGA GCTCTCGGTC
TGGCTCATCA GCAACGAGCT CCTCGAGGTC GATCTGCGGT TGGATAGCCG CGTCGAGAGC
GCGATGAGCG ACGAACAGGT CTTCTTCCCG CCCTATGACA GCGATGCGTT GGCGGCAGTC
CTCGCCCCCC GCCTCGAGCG CGCGTTCCGC GACGGCGTGC TCCCGGCAGA CGTACGCGAC
TACGGCGTGC GAGAGGCCGC CCGGCGGTGG GGTGACGCCC GGAAGGCACT GACACTGTTC
CGCCAGGCCG GTGAGACGGC GACCGACCGG GGCCTCGAGA CCGTGACCGA CGCCTGCATC
GACGCCAACC TTGAGACGAC CGAGCGCGAG GCGACCATCG ACAAGCTGCT CGACCTGCCG
GAAAACCACT TTCTGGTGTT GACGGGCGTG ACGGGTTGGT CCCGCGGCAC CGAGATCAAA
CAACCCGTGA CGACGGCCGA GATCCACGAG GTCGTCCAGG ACGACGCGCT GCCCGCCGAC
CTGCGCCTCG GGGAGCGGGC AATCCGCGAC GTCATCACCG ATCTTGAGAC GATGGGTCTC
GTCGAGACCT GGATCGACGC CCGCGGGGCT GAGGGCCGTG TCAAGCAGAT CGAGACGACG
TTCGATCCGC GATGGGTCCG CGACGTGATC GAGCCATACG TCACGGAGTC GACATACTTG
GCTACATTGG AGACAGACTG A
 
Protein sequence
MSKYDDLFAE TAPANSVFAN KRALDPLADP AEIAARDSQE RALATLINGV HDGYLPPTVS 
IYGPPGTGKT LTTRRICREF AARHDDVAVE YVNLKECRTL FSAANEILFA LTGAKKGAYE
GLDGVFTGIW TALEAYPEWT VLVLDEIDHV QHDTNYDPSD FFYRLLRGEG RLSRGIELSV
WLISNELLEV DLRLDSRVES AMSDEQVFFP PYDSDALAAV LAPRLERAFR DGVLPADVRD
YGVREAARRW GDARKALTLF RQAGETATDR GLETVTDACI DANLETTERE ATIDKLLDLP
ENHFLVLTGV TGWSRGTEIK QPVTTAEIHE VVQDDALPAD LRLGERAIRD VITDLETMGL
VETWIDARGA EGRVKQIETT FDPRWVRDVI EPYVTESTYL ATLETD