Gene Htur_1249 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHtur_1249 
Symbol 
ID8741839 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaloterrigena turkmenica DSM 5511 
KingdomArchaea 
Replicon accessionNC_013743 
Strand- 
Start bp1308255 
End bp1308923 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content57% 
IMG OID646511828 
ProductBacterio-opsin activator HTH domain protein 
Protein accessionYP_003402812 
Protein GI284164533 
COG category[R] General function prediction only 
COG ID[COG3413] Predicted DNA binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAACGA TCGCTGAGTT CCGCATTCCA GCCAGTGATA CCGCACTCGG CGCTACCTTT 
CACGCAGTTC CCTCACTCGT CTGTGAGATC GAGCCAGTGA TTGCCGCCGA TGAGTTTGGG 
ATGTGGATGA GCGGTGCGGA CCGCGCAGCA CTGAACGCCG CCCTGAGAGA GGACAGGACC 
GTCAGAGACC ATTCGCTCAT TACGAGTGAC GAAGCGCGGA GGTTGTACAC CATCCACTTT 
TCAAACGAAA TCGCAGAGAA CTTTTCTCTG GTTGCTGAAG AAGGCGGTAC GATGCTCGCG 
GCGTCAGCGC GAGCTGGCAT GTGGACGATC CGACTGCGGT TTCCGGCCCG TGAGAACGCC 
AGTCGTGTCT ATGAGCGACT GGCAGCGCGT GATATTCAGA TTGAGATTAC GCAAATCCGA 
TCACTCACAA CGACCACTGC CGATGACCTC GGGCTGTCAC CTGCGCAGTA TGAAGCGCTC 
ACTGCTGCGC TCACCTATGG CTACTTCGAG ATCCCGCGGG AGATCTCGTT AGAAGAACTC 
GCAGCGAAAC TGGACATCTC ACATCAAGCA CTCTCCGAAC GGTTTCGTCG CGCCTATCGG 
ACCCTTGTCG CCTCGTCGCT CGAGTTCGAT GCACGATGCG ACTTCACTGG GACAAAACCG 
AGCGAGTAG
 
Protein sequence
MATIAEFRIP ASDTALGATF HAVPSLVCEI EPVIAADEFG MWMSGADRAA LNAALREDRT 
VRDHSLITSD EARRLYTIHF SNEIAENFSL VAEEGGTMLA ASARAGMWTI RLRFPARENA 
SRVYERLAAR DIQIEITQIR SLTTTTADDL GLSPAQYEAL TAALTYGYFE IPREISLEEL 
AAKLDISHQA LSERFRRAYR TLVASSLEFD ARCDFTGTKP SE