Gene Htur_1126 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHtur_1126 
Symbol 
ID8741715 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaloterrigena turkmenica DSM 5511 
KingdomArchaea 
Replicon accessionNC_013743 
Strand+ 
Start bp1172683 
End bp1173339 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content64% 
IMG OID646511706 
ProductBacterio-opsin activator HTH domain protein 
Protein accessionYP_003402691 
Protein GI284164412 
COG category[R] General function prediction only 
COG ID[COG3413] Predicted DNA binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGATTTA TCGCCGAAGT TCACCTCGTT CACGACGAGC TCGCGCTGGC ACCGACGATC 
GCAAACCATC CCGGGACGAC GTTCAGGTAC GAATACGAGA CGTCGACCGA CGGCCGTCGG 
TTCCAGTTCG TCTCCGCGTT CAGCGACGAC GAGGCGGCTC TCGAGGAGTC GATGGCGGCG 
GATCCGACGG TCTCGGATCC GACGCGCATC GCGACGTTCG AGAACCGAAC GATCTTCCGC 
ATCGCACTCG AGACCGATCT CGCGGTCCTC CCCGACTGGG GCGGCGGGCA CGGGCTGTTC 
GTGTTCACGG TCACGAGCGG CGAACGCGGC TGGGTCGCTC GCATCTACCT GCCCAACCGG 
GACGCGCTGA TCGCGTTTCG AGCGCGGTGT CGCGACCGCG GAATCTCCTT TCGCGTGACC 
CAGCTGTACG ACACGTCGGT CTCCGACAGC GGTACCTTCC ACCTGACCGA CCAGCAACAC 
GAGATCCTCA TGATGGCATA CTACGGCGGC TACTTCGATA TTCCGCGCGG GATTACGCAG 
GACGATCTGG CCGAACGGCT CGGCATCTCG GACTCGGCAG TCTCCCAGCG ACTCCGACGC 
GCCATCGCGG AACTGATCAC GGCGACGATC GAGAACGATC GAATGCCGAA TCAGTAG
 
Protein sequence
MGFIAEVHLV HDELALAPTI ANHPGTTFRY EYETSTDGRR FQFVSAFSDD EAALEESMAA 
DPTVSDPTRI ATFENRTIFR IALETDLAVL PDWGGGHGLF VFTVTSGERG WVARIYLPNR 
DALIAFRARC RDRGISFRVT QLYDTSVSDS GTFHLTDQQH EILMMAYYGG YFDIPRGITQ 
DDLAERLGIS DSAVSQRLRR AIAELITATI ENDRMPNQ