| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Htur_1045 |
|---|
| Symbol | |
|---|
| ID | 8741632 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haloterrigena turkmenica DSM 5511 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013743 |
|---|
| Strand | + |
|---|
| Start bp | 1081275 |
|---|
| End bp | 1083098 |
|---|
| Gene Length | 1824 bp |
|---|
| Protein Length | 607 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 646511623 |
|---|
| Product | extracellular solute-binding protein family 5 |
|---|
| Protein accession | YP_003402610 |
|---|
| Protein GI | 284164331 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACTGTA ATCCAACCGA TCCTGTCGAC GGCGTCGATC GACGCTCCGT CCTGGCTGCG
GGCGCAGCCG GGCTCTCGCT CTCCCTGAGC GGCTGTGTCG ATACGGTCCA ACGCGTCGTC
GACCAGGACG GTACCGACCA ATTGTCGCTC TCCATCGTGA CGGTCCCCGC GGACGCCGAC
CGGGAAAGCA TTCGGATCGC CTATCACCTC GAGTCGCATC TCGAGGCGAT CGGCGTGGAC
GTGACCCTCA AGGTGCGCTC TCGTACCGAC TTCCTCAAAA CGGTCCTGAT CGACCACGAC
TTCGATATCT ACGTCGGTCA GCATCCCGCC GATTACGATC CGGACTTCCT CTACGAAGCC
CTCCACTCCA CGTACGCAAA CGAGGCCGGC TGGCAGAACC CCTTCGGGTT CGACAGCATG
GCCTTCGACA CCCTCCTGGA GGATCAACGC CGGGCCGACG GTGAGCAGCG CAAGCAACGC
TTAGCAAATG TACTGCGCGG AGTTGCAGAC GAGAAACCGT TCGATCCGAT CTGTCGTCCC
GACGAGATCC GGGTCGCTAA CACCACCCGC TTCGACGGTT GGGATCAGGG TCACCTCGCG
ACGCGACGCG GCTATCTCGG CCTCGAGCCG GACGCCGGCG TCGAACGATT GAACGCGCTC
GTGACCGACG CCAGACCGTC GGTCAACGTC AACCCGATCT CGGCGACGGT CCGGGAACGG
GGGACGGTCG TCGACCTGCT GTACGACTCG CTCGGGACCG TCGTCGACGG CGAGGTCCTG
CCGTGGCTCG CGGAGTCGTG GGAGTGGGTG ACCGATGCCG AGACCGACGA GAAGAAAACC
GAAGAGATCG CCGAGCCGAC CCGAAACACG ACGACGGCGC GGGTTTCGCT CCGAGAGGAC
TGTCGGTTCC ACGACGGCGA ACCGGTTACC GCAGCGGACG TCGAGTTCAC CTATCAGTTC
TTCCAGGATA CCGTGCTCGG TCACGCGACG CCGTCGCCGC CGCCCCGCTA TCGCGGTCAC
GCGAGCGCGA TCGACGATAT CGAGATCGAG GACGAGTACA CGCTGCGGAT CACCGCCGCC
GCCGGCACGG ACGTCTGTGA ACGCGCGTTT ACCGCCCCGA TCCTCCCGAA ACACGTCTGG
CAATCGGAAC TCGAGGACCG GCTCGGTAAC TCTCAGGAGT TTTCGGCGCC GCAAGGATCC
TGGAGTTTGG TCACCAGCGA CTCGATCGAT CCGACCGGGA GCGGTCCCTA CCAGTTCAAG
AACAACTCCG AACGGGAACA CCTCACGCTC GAGCGGTTCG ACGATCACTT CACGCTGCGC
GAGGACGCCG CAGGCGACCA CCTCCTCGCT CCACGCGTCG AGGAGCTCCG GTTTATCGTC
GATCCCGGCA GCCCGTCCTC CATCTCGCGG GTCGCCAGCG GCAACGCCGA CCTCACCTCG
TCGATGCTCG CGGCGTACTC GCTCAGCGAC ATTCCAGAGG ACAACCCCGA CGTCGAACGG
CTCGAGTCGC CCTCGTGGAC GTTTTACCAC CTCGGGTTCA ACACGCGGGC GCCGCCGTGT
AGCAACCTCC ACTTCCGGCG CGCGATCTGT CGACTGATCG ACAAGGAGTG GATCGCGAGC
GAAGTCTTCG GCGGCCACGC GGACCCGCTC GTGGCTCCGG TGACCGAGGA GTGGACGCCC
GACGACCTCG CGTGGGACGG TGCGGACCCA GAAACGCCAT TTGCCGGCAC CGACGGGACG
CTCAACGTCA ACGCGGCGCG TAACGCGTTT CAGGCGGCCG GCTACTACAC CGACGACGAG
AACCGACTAC AGGGGCGATA CTGA
|
|---|
| Protein sequence | MNCNPTDPVD GVDRRSVLAA GAAGLSLSLS GCVDTVQRVV DQDGTDQLSL SIVTVPADAD
RESIRIAYHL ESHLEAIGVD VTLKVRSRTD FLKTVLIDHD FDIYVGQHPA DYDPDFLYEA
LHSTYANEAG WQNPFGFDSM AFDTLLEDQR RADGEQRKQR LANVLRGVAD EKPFDPICRP
DEIRVANTTR FDGWDQGHLA TRRGYLGLEP DAGVERLNAL VTDARPSVNV NPISATVRER
GTVVDLLYDS LGTVVDGEVL PWLAESWEWV TDAETDEKKT EEIAEPTRNT TTARVSLRED
CRFHDGEPVT AADVEFTYQF FQDTVLGHAT PSPPPRYRGH ASAIDDIEIE DEYTLRITAA
AGTDVCERAF TAPILPKHVW QSELEDRLGN SQEFSAPQGS WSLVTSDSID PTGSGPYQFK
NNSEREHLTL ERFDDHFTLR EDAAGDHLLA PRVEELRFIV DPGSPSSISR VASGNADLTS
SMLAAYSLSD IPEDNPDVER LESPSWTFYH LGFNTRAPPC SNLHFRRAIC RLIDKEWIAS
EVFGGHADPL VAPVTEEWTP DDLAWDGADP ETPFAGTDGT LNVNAARNAF QAAGYYTDDE
NRLQGRY
|
|---|
| |