Gene Htur_0958 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHtur_0958 
Symbol 
ID8741543 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaloterrigena turkmenica DSM 5511 
KingdomArchaea 
Replicon accessionNC_013743 
Strand
Start bp983145 
End bp987005 
Gene Length3861 bp 
Protein Length1286 aa 
Translation table11 
GC content66% 
IMG OID646511536 
ProductCheA signal transduction histidine kinase 
Protein accessionYP_003402525 
Protein GI284164246 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0643] Chemotaxis protein histidine kinase and related kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGACT ATCTAACCGA CTTCGTTCAG GAGAGCGAAG AACGAATTAC GGAACTGAAC 
AACGCGTTGC TCACGTTAGA GCGCGATCCG ACCGACGACG AGGCGATGGA GAACATCTTC
CGGGTCGCAC ACACGCTCAA GGGCAACTGT GGCGCGATGG GACTCGAGCC GGCGAGCGAT
CTCGCCCACG CGATCGAGGA TCTGCTCGAC GCCGTCCGAC AGGGCGGTCT CGAGGTGACG
CCCGAACTGA TGGACGTCGT CTTCGACGCG GTCGACGAAC TCGAGACGAT GATCGACGAG
GTCGCGGCCG ACGGCGAGAT CGAGACCGAT CCGTCGGCGA CGATCGCGGC CCTTCGAGAG
CAACTCGAGG ACGGCGGCGG TCCCGCCGCG ATCACGACGC CGTCGACCGA CGAGATCGAC
GCCGTCACGA AACGGTTCGA TCCGCCGGCC GACGACGAAC ACCGCGCCTA CCTGGTTCGG
CTCGTAATCG CCGATCGGGA CGGCGTCAAC AGCGGCAAAC TCGTCGTCGA CGCGCTGATC
GACGCGTTCG ATCTGATCGG TACTCAGCCG CCACGAGACG AGATCGAGGC CGGCGAGTAC
CGCGGCACGT TCGACGCCGT CTTCGGCAGC GCGGTCGGGA AATCCGCGAT CACGTCCGGT
CTCGAACCGG TCGAGGAGGT CGCCGACTTC GAGCTCGTCG ACATCAGCGA CCGGTTCGAC
GCCCGGTCTG ACGACTCGGA GGCGGCGACC GAACCGGGCG ACGAGATCTC CACGGAAGAC
GCCGCCGATC TCGAGGTCGA CGACCTGCTC GACGAGTTCA ACGAGTTCGA CAACTTAGAC
GAGATGGTCG AGGACGTCGA CGACGACGAA CTCGAGGCCT TCGAGGAGAT GGGCGAGGCC
GGCTCGTTCG ACGATCTCCT CGACGACGAC GACCTCGAGG TCGACGGCGA ACTCGGCGAG
CCGGCAACCG ATCCGATCGA CGGCGACGCC GATGACGCGG CGTCCGACGC CGACGTGACC
GAGCAGGCGA CCGGCGACGC ATCGGCCGAC GCCGAAGCGG ACGACGTCGA CGACGCCAAC
GCCGTCTTCA ATGAGCTCAA AGACGAGGTC GAGATGGTCG GCTTCGACGA ACTGCAGGAC
GAACTCGAGG AACTCGAGTT CGACGAGTTC GACAACGACG ACGAGGTCGA TATGGACGAA
CTCCTCGGCG AGGACGCGGC CGACGACGAC ACGTTCCTCG CGGGGCCGGA ACCGACCGAC
GACGCCGTCG ACGACATCCT GGTCGACGCC GTCGACGAGG ACGAACCGGC GACCGACGCG
GTAACGGACG ACGAACTCGA CGAGTTGCTG GCCGACGACG AGGAAGCGCC CGCCGATGCG
GTGACCGACG AGGAGGTCGA CGACCTGCTG GCTGGCGGCG ACGACCCCGC CGACGCGGTG
ACAGATGACG ACCTCGACGA TCTGTTCGCG GGCGACGAGG AAGCGTCGGC CGACGCGGCG
ACGGACGATG ACTTCGACGA TCTGTTCGCG GACGACGACG CTGCTGACGA GCCGACGGAC
GACGAGGAAC GCACGGCAGT CGAGCCGTCC GAACCCGATT CGGCGTCCGC CGACGAGATC
GTTGCGGAAG CGACGAGCGA GCCGGAATCG GCCGCCGACG TGGAGACCGA ACCCGTGCTC
GAGGACGACG CAGACGTCGA CGAGCCGGTG ACGGGCGACG CCGACGTCGA AGCGGCCGCA
GAAACGGAGC CGGCCACGGA AACAGCGTCA GCCGTCGAAC CGGAGTCGCC CGCGGTCGAT
ACGGAGACTC AGACCGACGT GGTCGACGAC GATCTCGAGT CATCGACGGT CGCGGAAAGC
GATCCCGTCG GTACGGAGGA AGACGCGGCC CTGCAAGACG AGGACGAACC CGCGGTCGAC
GACCCGTCGA CGCTGCTGGA GTCGGACGAC GCGATCGAAG CAGCGTCGGA ACCGGGAGAC
GACAGCGACG CGCTCGAGGT CGAGTCAGAG ACCGACTCGA CCGACCTCGA GACGACCGAT
ACAGCCGCCG AAGCCGACAG CAGGGACGGC GAGTCCATCG AAGCAGGCAC CGAACTCAAA
GATCCGACCG ACGACGGAGA CGAGACGCTC GACGACGACG CCACCGCGGT CGGCTCCGGT
TCCGACGGAC AGACCGCGGA CGACGCCGAG AGCGAGTTCG ACGACGGCCT CGAGACGAGT
TTCGAGGACG AGTTCGATTC GCCGGCGTCG GCCGACGACT CGAGCGACGA CCCGTTCGCC
GCCGGCGAGG ACGATCCGTT CGCGGACGAC TCGTTCGCGG ACGACTCGTT CGCGGACGAC
TCGTTCGCGG ACGAGGATCC GTTCGCCACT GATACGACGG ACGACTCCTT CGGAGACGCC
GACGCGTTCG CGGACGACGA TTCGTTCGCG GACGACTCGT TCGATACCGA GTTCGAGTCG
TCGGACGACG GATTCGACGA CGTGACCGCC GACGCCGACG CGGAGTCGGT CGACGACTTC
GACGAGACGT TCGGTGACGA GGGCGGCGAG ACGTCGACCG ACGCGAGCGC GGAAACGCCG
TCGTTCGACG ACGCCGCCGG GGCCGACGCG AGCGACGAAT CGGCCGAGGA GGTCGTCCGT
CGGATCGAGG AACCGACCCT CGAGAACCCC GATCTGACGG TTCCGGAGTC GACGGACCGA
CCGGACGCCG ACCAGCAAAC CGACGAGATC CAGTCGGTCA GGGTCGACAT CGAACAGATC
GACTCGCTGC TGACGCTCGT CGAGGGGCTG GTCACGAGCC GCGTTCGGCT CCGCCACACC
GCGACCGAAA GCGAGGCGAC CGATGCGCTC GAGGCGGAAC TCGACGACCT GGAGGACCTG
ACGACGGACC TCCAGGAGAC GGTGATGGAC ATCCGGCTGG TCCCCTTGCA GACGGTCGCG
AACCGACTGC CGCGGGTCGT CCGCGACATT GCACGCGATC AGGACAAGGA GGTCACCTTC
GAAATCACCG GCGAGGACGT CGAACTCGAC CGCAGTATCC TCGATCGGAT CGGCGACCCG
CTGATCCACC TGGTTCGCAA CGCCGTCGAC CACGGGATCG AACCACCGGA GGAACGGGAG
GCGGCCGACA AACCCCGAGA GGGGTCCGTC GAGGTCCACG CCGACCGCTC TCGCGACCGA
GTGCAGATCA CCGTCGAGGA CGACGGGAAC GGCCTCGATC CGGACCGACT TCGCGACGAA
GCCGTCGAGG CCGGCGTCCA CACCGCGGAC GAGGTTGCCG AACTGTCCGA CGACGAGGCG
TACGACCTCA TCTTCCACCC CGGTCTCTCG ACGGCCGACG AGGTGACCGA CGTCAGCGGC
CGCGGCGTCG GCATGGACGT CGTCAAGCGG ACGATCGAGG ACCTCGACGG AACTGTCTCG
ATCGACAGCG AGGCCGGCGA GGGGACGACC GTGACGATGA CGCTCCCGGT GTCGGTCGCC
ATCGACGACA TCCTGTTCAT CGAGAGCGGC GGCGAGGAGT TCGGAGTGCC GACGAAGGCC
GTCCAGGACA TCGAACCGGC CGCCACTCTC GAGACCGTCG ACGGACAGCG GGTCCTCACC
GACGGCGACG ACACCTACTC CGTCATCGAA CTCGACGACG TCCTCGAGAC GCCGCGAGCC
GGCGCCAACG GAGACGGAAT GGTCGTGCGG ATCCGCGACG ACGTCCGGTC GGTCGCCATT
CACTGTGACC ACGTGTACGG TCAACAGGAA GTCGTCGTCA AGCCCTTCGA GGGGTTCATG
AGCGATATTC CTGGACTCAG CGGAGCGACG GTTCGAGGAC GGGGGGAAGT GGTCAACATC
CTAGACGTAA CAACACTATG A
 
Protein sequence
MTDYLTDFVQ ESEERITELN NALLTLERDP TDDEAMENIF RVAHTLKGNC GAMGLEPASD 
LAHAIEDLLD AVRQGGLEVT PELMDVVFDA VDELETMIDE VAADGEIETD PSATIAALRE
QLEDGGGPAA ITTPSTDEID AVTKRFDPPA DDEHRAYLVR LVIADRDGVN SGKLVVDALI
DAFDLIGTQP PRDEIEAGEY RGTFDAVFGS AVGKSAITSG LEPVEEVADF ELVDISDRFD
ARSDDSEAAT EPGDEISTED AADLEVDDLL DEFNEFDNLD EMVEDVDDDE LEAFEEMGEA
GSFDDLLDDD DLEVDGELGE PATDPIDGDA DDAASDADVT EQATGDASAD AEADDVDDAN
AVFNELKDEV EMVGFDELQD ELEELEFDEF DNDDEVDMDE LLGEDAADDD TFLAGPEPTD
DAVDDILVDA VDEDEPATDA VTDDELDELL ADDEEAPADA VTDEEVDDLL AGGDDPADAV
TDDDLDDLFA GDEEASADAA TDDDFDDLFA DDDAADEPTD DEERTAVEPS EPDSASADEI
VAEATSEPES AADVETEPVL EDDADVDEPV TGDADVEAAA ETEPATETAS AVEPESPAVD
TETQTDVVDD DLESSTVAES DPVGTEEDAA LQDEDEPAVD DPSTLLESDD AIEAASEPGD
DSDALEVESE TDSTDLETTD TAAEADSRDG ESIEAGTELK DPTDDGDETL DDDATAVGSG
SDGQTADDAE SEFDDGLETS FEDEFDSPAS ADDSSDDPFA AGEDDPFADD SFADDSFADD
SFADEDPFAT DTTDDSFGDA DAFADDDSFA DDSFDTEFES SDDGFDDVTA DADAESVDDF
DETFGDEGGE TSTDASAETP SFDDAAGADA SDESAEEVVR RIEEPTLENP DLTVPESTDR
PDADQQTDEI QSVRVDIEQI DSLLTLVEGL VTSRVRLRHT ATESEATDAL EAELDDLEDL
TTDLQETVMD IRLVPLQTVA NRLPRVVRDI ARDQDKEVTF EITGEDVELD RSILDRIGDP
LIHLVRNAVD HGIEPPEERE AADKPREGSV EVHADRSRDR VQITVEDDGN GLDPDRLRDE
AVEAGVHTAD EVAELSDDEA YDLIFHPGLS TADEVTDVSG RGVGMDVVKR TIEDLDGTVS
IDSEAGEGTT VTMTLPVSVA IDDILFIESG GEEFGVPTKA VQDIEPAATL ETVDGQRVLT
DGDDTYSVIE LDDVLETPRA GANGDGMVVR IRDDVRSVAI HCDHVYGQQE VVVKPFEGFM
SDIPGLSGAT VRGRGEVVNI LDVTTL