Gene Htur_0946 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHtur_0946 
Symbol 
ID8741531 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaloterrigena turkmenica DSM 5511 
KingdomArchaea 
Replicon accessionNC_013743 
Strand
Start bp969325 
End bp973332 
Gene Length4008 bp 
Protein Length1335 aa 
Translation table11 
GC content64% 
IMG OID646511524 
Producttype II secretion system protein E 
Protein accessionYP_003402513 
Protein GI284164234 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0630] Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTATTG ACGAGGCCGA CCAGTCGGAT GCCGGGGACT TTTCTGAGGG GGAGGCATCC 
GAGTCTGCGT CGGAGGCGAA TCGATCTCGC GGGTCGGACG GCGATGCGAA CTCAGGTTCG
GGAGTTTGCG TCGGCGAGTA CACGTGGGAG AATTTCATGG AAGAGTACGG ATACAGCGAC
GACGCGTCGG TGCTGTATCC CGACGATCCC GGCGAGACGA CGTCGGACGA CCAACTGGGG
TTAGATACCG ACGAAGGGCC CGAACACACG GTCCCGACGG GCGACGACTG GAAGCAGGTC
GAGTTCGACC CCGAGTCCTA TCTGGGCTAC CACCCCGACG ATCTGGACTC GACGGTCGTG
CCGACCGCCG GCGACAACGC CGAGGAACTC TGGGACGTCT TTCGGGAGTA CGCCGATCCA
GAGACGACGC CGGTCGTCAA AGACACCTGG ACCTGGGAGC ACTACAAGTG GGAGTACTAC
TACGAGGACG ACGGCTCCCG ACCGCGGGAT AGCGACGGTG AAATCGTTCG CCACGACGAG
GAGGAGGCGC TCGGCTTCGA TCCGGAGACC GTAGAACAGC GCCTGTTCGC GGCCGACGAC
GCCGCGATGG AACTGGACGA ACTCATCGAG GAGCGAACCG TCAACGTCCA GGAGGAGATC
GACGAGGACG AGTTCTTCTC GACGACCGCG GGCAACACGA CCGTCACCAA CCGCTACGAT
CTGGAAAAGG CCGTTCCGCT GGACAAGAAG ACCCACTTCC GAGAGGTCGA GCGCTACTGG
GTGAACAAAC CCTACGCCTG CGTTGTTATC TTCCACTCCG AGAAGGAAAA CGAGAAGAAG
TACTACCTGA TCGAGCCCTA TCTGAACGAG ATCGAACTCG AGTTACAGGA GTTCCTCTCG
GGCAAACTGC GAACCGCGAT CAAGTACTCC GACGAGGGGA TCAAGGAGAA GGCGACCGAG
GACGGCCGCC GGACGGTCAT CGAGGACGAG ACCCGCCAAC TGCTCAAGCG CTACGATCTG
TTCGAGAAGA CAGCCAGCAG TTCCCGGGAG AGCGTCCTCG ACACGCTGCG AAATCTGCTC
GACGACGAGG ACGACGGTCC CGACGAGGAC GACGGTCCCG ACCCGCTCGA GGGGCTCTCC
GTCCGACCCG AGCCGGCGAT CCTCGAGGCC GATCCGGACA CGCTAAGCGA GTATCAGGTC
GAGAAACTGC TCTACCTGCT CAAGCGCAAC TTCATCGGCT ACGAGCGCAT CGACGGGATC
AAACACGACA TCAACGTCGA GGACATCTCC GTCGACGGCT ACAACTCGCC GGTGTTCGTC
TACCACTCGG AGTACGAGCA GATCATCTCG AACGTCTACC ACGGCGAGGA CGAACTCGAC
GACTTCGTCG TCAAACTCGC CCAGCGCTCC GGGAAGGGGA TCAGCAAACG GCTGCCGCAG
GTCGACGCGA CCCTCCCCGA CGGCTCGCGC GCCCAGTTGA CCCTGGGGAA GGAGGTGTCC
GACCACGGGA CCAACTACAC CATCCGTCAG TTCAAGGACG TCCCCTTTAC CCCGATCGAC
CTCATCAACT GGAACACCTT CTCGCTGGAC GAGATGGCGT TCCTCTGGCT CTGTATCGAG
AACCACAAGA GCCTGATCTT CGCTGGAGGT ACCGCGTCCG GGAAGACCAC CTCGCTGAAC
GCCGTCTCGC TGTTTATCCC CTCGAGCGCG AAGATCGTCT CCATCGAGGA CACCCGGGAG
GTCGAACTCC CGCAGCGAAA CTGGATCGCC TCCGTTACTC GGCCGTCGTT CGCCGACGAC
GAGCAGGGCG ACGTCGACGA GTTCGACCTG CTCGAGGCCG CGCTCCGGCA GCGACCCGAC
TACATCGTGA TGGGTGAGAT CCGTGGTGAG GAGGGGCGGA CGCTGTTCCA GGTCATGTCG
ACGGGTCACA CGACCTACAC GACGTTCCAC GCCGACTCCG TCGACGAGGT GTTAAAGCGG
TTCACGACGG ACCCGATCAA CGTCTCGAAG ACGATGTTCA CCGCGCTGGA CCTGGTTTCG
ATCCAGACCC AGACGCGGGT GCAGGGTCGG AAGGTCCGCC GGAACAAATC TCTCACGGAG
ATCAACCACT ACGAGGCCGA ACACGACGAG ATCAACGTCC AGGACGTCTA CCAGTGGCAG
GCCGAGACCG ACGAGTTCCT CAAAATGGGG GACTCGAATA CCTTGGAGGA GATCCAGTTC
GACCGCGGCT GGAGCCGCGA GAAACTCGAG GAGGAACTGT TCAAACGCGA GGTCATCCTC
GCCTACCTCA TCAAGAACGG ACTCAACACG TACGCGGAGG TCGCGGCGAC AGTGCAGGCG
TTCATCAACG ACCCCGACAC GATCCTCACG CTCATCGCGA ACGGCCAGCT CGAGGACAGC
CTCGAGGACC TCCGGGAGAT GGAGAGCGTC CTGATCGACG TCGATCCGGA GAAAGAGGAA
CTCGTCCCGC GACCGGACGC GACCGACGAG ACGTACAACA TCTCGATGGA CCTGCTCGAA
CGCGCCGAGG AGTCGCTGTT CGAGGAGTAC CGCGGCAAAA CGCCGAGCGG ATTGGACAGC
GCTCTCGGGG GGCCCGAGAC GGAGGAGCCG ATCGAGGTTG ACAGCGCCGA CGCCGACGAG
TTCGACTTCG CCGGCGACGT CGACGGCTCG GTCGACGACG ACGAGTGGGA ACTCGGCGAC
GGCTCGAGCG GCTTCGGCGC CGGCGAGGAC GCCGGGGAGC CGGCGTGGCT CAGCGACGAC
ACCGGCTTCG ATATCGGCGG CGACGAGGGC GCCGCCGACA GCGCCGGAAC GGCTGCGAAC
GCCGACGAGG GGGTCGCCGC TGAATCGCCT GATGCCGGCA CCACGGACGA GACGTCCGAC
GGATTCGAGA TCGATGACGA GACGGGCGGC GTCAGCGGCC CACCTGCGCC GGCGGCGAGC
GCGGACGGCG CGGACGCGGA GGCGACGGCC CCGCAGCCGG CAGCCGGCGA CGAGACGGAG
ACGAACACAA CCGTCATGCC GACGGATGAC GCCGACGACG CCGATCTCGG CGGGCTGTTC
GACGATATGG GCGACACCAT CGACAGGCTC GACGCGGACG GCCAGCCGGA ACCGCCCGCG
GAGACCGACG CCGCGTCGAC GGCCGAGCCC GACACGTCCG GCTTCGATTC GATGTTCCCC
GAAGACGACC TCGAGTCGAT CTTCGACCCC GAATCCGACG CGGAGACGGC CGGCGACTTC
AGCGATCAGT TCGAGCCGGC GACCGCCGAC GAGCCGGTCG GCGACGAACT CGAGACCGCC
GACGAACCCG ACGAGACGCC GACGATCGAT CTCGGAGCGG CGGTCGACGA CGCTGCCGAA
GCCGACGAGA CATCGACGGC CGCACCCGAG GAGTCGACCG ACGAAACCGC TGAACCCGAC
GAGACGCCGA CGATCGACCT CGGAGCGGCG GTCGACGACT CCGCCGGGGC GGACGACGAC
GCCGAAGAGG TTGCCGAATC GGAAGCTGAC GCCGATTCCT CGAGTATCAT CGACGACGGC
AGCGACGATG ATGCCGCTGT CGAGAACGCC GATAGTATCG TGGCCGACGA ACCGACGGAC
GATGAGGCGG AGTCGGGACC GGACGCCACA CCCTCGTCGA ACGAGCAAAG CGAAGGTGAC
GGGCGTCTCG AAGGCGATGG CGACGACGCT CCGGTCGACC AGCCGGCCGA CGAGGAACCG
ACGGCGACCG CAGCTGATCC ACCCGGCGAG GATCGCGACG ATCCGACGGA GCCGGCGGAA
GGTGACGATG GTACCGGTGA CTCGGAGTCG ATCTTCGGGA CCAAGTCCGA CTCGATCTTC
TCCGAGGACT CGGAGGCGGA CGACGCCGAT GACGGGTCGC TGTTCGAGGA CGAACAGGCG
CAGGCCGAAA CGGACGATTC GATCTTCAAA CCGGCCGAGA CCGAGGACGA CGAGCGGACG
GACGACCAAA TCGATCCCGC CGACGATAAC GAGGATACCA ACGCATGA
 
Protein sequence
MAIDEADQSD AGDFSEGEAS ESASEANRSR GSDGDANSGS GVCVGEYTWE NFMEEYGYSD 
DASVLYPDDP GETTSDDQLG LDTDEGPEHT VPTGDDWKQV EFDPESYLGY HPDDLDSTVV
PTAGDNAEEL WDVFREYADP ETTPVVKDTW TWEHYKWEYY YEDDGSRPRD SDGEIVRHDE
EEALGFDPET VEQRLFAADD AAMELDELIE ERTVNVQEEI DEDEFFSTTA GNTTVTNRYD
LEKAVPLDKK THFREVERYW VNKPYACVVI FHSEKENEKK YYLIEPYLNE IELELQEFLS
GKLRTAIKYS DEGIKEKATE DGRRTVIEDE TRQLLKRYDL FEKTASSSRE SVLDTLRNLL
DDEDDGPDED DGPDPLEGLS VRPEPAILEA DPDTLSEYQV EKLLYLLKRN FIGYERIDGI
KHDINVEDIS VDGYNSPVFV YHSEYEQIIS NVYHGEDELD DFVVKLAQRS GKGISKRLPQ
VDATLPDGSR AQLTLGKEVS DHGTNYTIRQ FKDVPFTPID LINWNTFSLD EMAFLWLCIE
NHKSLIFAGG TASGKTTSLN AVSLFIPSSA KIVSIEDTRE VELPQRNWIA SVTRPSFADD
EQGDVDEFDL LEAALRQRPD YIVMGEIRGE EGRTLFQVMS TGHTTYTTFH ADSVDEVLKR
FTTDPINVSK TMFTALDLVS IQTQTRVQGR KVRRNKSLTE INHYEAEHDE INVQDVYQWQ
AETDEFLKMG DSNTLEEIQF DRGWSREKLE EELFKREVIL AYLIKNGLNT YAEVAATVQA
FINDPDTILT LIANGQLEDS LEDLREMESV LIDVDPEKEE LVPRPDATDE TYNISMDLLE
RAEESLFEEY RGKTPSGLDS ALGGPETEEP IEVDSADADE FDFAGDVDGS VDDDEWELGD
GSSGFGAGED AGEPAWLSDD TGFDIGGDEG AADSAGTAAN ADEGVAAESP DAGTTDETSD
GFEIDDETGG VSGPPAPAAS ADGADAEATA PQPAAGDETE TNTTVMPTDD ADDADLGGLF
DDMGDTIDRL DADGQPEPPA ETDAASTAEP DTSGFDSMFP EDDLESIFDP ESDAETAGDF
SDQFEPATAD EPVGDELETA DEPDETPTID LGAAVDDAAE ADETSTAAPE ESTDETAEPD
ETPTIDLGAA VDDSAGADDD AEEVAESEAD ADSSSIIDDG SDDDAAVENA DSIVADEPTD
DEAESGPDAT PSSNEQSEGD GRLEGDGDDA PVDQPADEEP TATAADPPGE DRDDPTEPAE
GDDGTGDSES IFGTKSDSIF SEDSEADDAD DGSLFEDEQA QAETDDSIFK PAETEDDERT
DDQIDPADDN EDTNA