Gene Htur_0921 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHtur_0921 
Symbol 
ID8741505 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaloterrigena turkmenica DSM 5511 
KingdomArchaea 
Replicon accessionNC_013743 
Strand
Start bp942609 
End bp943355 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content67% 
IMG OID646511498 
ProductBacterio-opsin activator HTH domain protein 
Protein accessionYP_003402488 
Protein GI284164209 
COG category[R] General function prediction only 
COG ID[COG3413] Predicted DNA binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAGAGT TCGTCTTCGC CCTCGAGTAC GAACCGGGCA CGAACCCCGT CGCCGACGTG 
TTGGCGGAGT ACCCGGACAC CTCGATCCGC TCGCTGTCGT GTCACGTCAC CGCGGACAGC
CTCTGGCGGG TCGACCACGC CGAAGGGTCG GCGGAAGCGC TCGAGGCCCT CGAGGACGCC
TACAAGAACG CGGACTTCTT CGCGGACTGT CTCGTAAAGG ACGACTGCGG GGCCGACTGC
GAGGTGCAGG TGCTCGACCG CTCGAACGAC ACGCTGGTCG TCTACACCTA CTGGGACCGC
ACGGACGTCT GTACCTCGGT TCCCCACGTC GCCCTCGAGT ACTTAGGCGA GGGGCTGCTG
TTCGAGACCT ACCGCGAGGG CCGGCGCTAC CGCTGGCGGA TCGTGCTGGG GAGCGACGCG
CCGATCCACG AGTTCTTCGA CGCGCTGGGT GACGAGGTCG GCGAGTGTAC CGGCATCGAG
ATGCTGCGAT TGACGGAACT CGATCCCGAT CGGGCTCACC TCGAGCCCGA GCGAGAGCTC
CCGGACGAAC AGCGCGAGGC GCTACGGGCG GCCGTCGAAC ACGGCTACTA CGAGACGCCC
CGGCGGATCG AACTCGGCGA TCTCGCCGAG AAGCTCGAGA TTCCGCGGTC GACGCTTTCG
TATCGACTCC GGCGGGCCGA GTCCAGCCTC GCGACGACAT TCGTCGAGGA AGACGACTCG
CTCGAGACGC TGGCGGCCGG GCTGTGA
 
Protein sequence
MREFVFALEY EPGTNPVADV LAEYPDTSIR SLSCHVTADS LWRVDHAEGS AEALEALEDA 
YKNADFFADC LVKDDCGADC EVQVLDRSND TLVVYTYWDR TDVCTSVPHV ALEYLGEGLL
FETYREGRRY RWRIVLGSDA PIHEFFDALG DEVGECTGIE MLRLTELDPD RAHLEPEREL
PDEQREALRA AVEHGYYETP RRIELGDLAE KLEIPRSTLS YRLRRAESSL ATTFVEEDDS
LETLAAGL