Gene Htur_0560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHtur_0560 
Symbol 
ID8741142 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaloterrigena turkmenica DSM 5511 
KingdomArchaea 
Replicon accessionNC_013743 
Strand- 
Start bp590675 
End bp591694 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content65% 
IMG OID646511139 
Productprotein of unknown function UPF0118 
Protein accessionYP_003402131 
Protein GI284163852 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAACATCA GCAAGGGGTT TCTCCTGGCA CTCGTCGCGG TTTTGGCCTT CCTCTCGTGG 
CTGCTCATCG CGCCGTTCCT CCAGTACGCC CTCATCGCCG TACTCCTCGC GTACGTTCTC 
CGCCCGGTCC AGCGTCGCCT CGAGCGGCGG ACGTCGTCGA TGATCGCCGC GATGGCGCTC 
GTCTTATTGA CGATCACCGG CTTCGTGATT CCGCTCGCGA TCATCCTCAC CGTCGTCATC 
CAGGACGCCA CGAGGATCGT GGAAAACCTC GACGCCGACT CGGTCAGCGT CACGGAAGTC 
GAATCGCTCA TCCAGGAGCA GACGGGGATG AGCGTCGATC TGATGTCGTC GCTGACGGAC 
GCGGCTCGAC AGGGCGGGCA GCTGGTCCTC GAGCAGTCGA CCGCGTGGCT GAGCGCGTTC 
ACCCACGCGC TGATCGGCTT CGGGCTGGCG CTGTTCATGC TCTACTACCT GCTCAAGGAC 
GGCGACAAAC TCATCGGCTG GATTCGCAAG CGGACGCCGC TACCGGACGA CGTCCAGGAC 
GACCTCTACA CCGAACTCGA CGAGGTCATG CATGCCGTCC TCATCGGCCA CGTCCTCATC 
GCCCTCGTTC AGGGACTGCT CGCGGGGATC GGGCTGATCG TCACCGGAAT CCCGAACGCC 
GCGTTCTGGA CCGTCATCAT GGTCGTTCTC GCGCTGATTC CGATCATCGG CACCTTCCTC 
GTCTGGGGGC CCGCCGTCGT CTTCCTGCTG GCGACCGGCG AACCGCTGTT TGCCGTGGGA 
CTGTTCGTCT ACAGCACCGT CATCGTCGGC CTCTCGGACG ACTACCTGCG GCCGCTCGTC 
GTCGACCGCT ACGCCGAACT GAACCCCGCG GTCATCATCG TCGGCGTCCT CGGCGGCGCC 
TACGCCTTCG GCTTCATGGG GCTGTTCTTC GGACCGGTCA TCCTCGGCGC GCTCCGGGCG 
ACGCTGACCG TCTTCCACGA CAATTACGAC CGCCTCGAGA GAGAGAAGTT CGGCGGCTGA
 
Protein sequence
MNISKGFLLA LVAVLAFLSW LLIAPFLQYA LIAVLLAYVL RPVQRRLERR TSSMIAAMAL 
VLLTITGFVI PLAIILTVVI QDATRIVENL DADSVSVTEV ESLIQEQTGM SVDLMSSLTD 
AARQGGQLVL EQSTAWLSAF THALIGFGLA LFMLYYLLKD GDKLIGWIRK RTPLPDDVQD 
DLYTELDEVM HAVLIGHVLI ALVQGLLAGI GLIVTGIPNA AFWTVIMVVL ALIPIIGTFL 
VWGPAVVFLL ATGEPLFAVG LFVYSTVIVG LSDDYLRPLV VDRYAELNPA VIIVGVLGGA 
YAFGFMGLFF GPVILGALRA TLTVFHDNYD RLEREKFGG