Gene Htur_0534 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHtur_0534 
Symbol 
ID8741116 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaloterrigena turkmenica DSM 5511 
KingdomArchaea 
Replicon accessionNC_013743 
Strand- 
Start bp568978 
End bp569637 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content67% 
IMG OID646511113 
ProductBacterio-opsin activator HTH domain protein 
Protein accessionYP_003402105 
Protein GI284163826 
COG category[R] General function prediction only 
COG ID[COG3413] Predicted DNA binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGAGG CGCGGGTCAT CGCCGAAATC ACGCTCGTCC ACCCCGAGCT GGTGCTTACC 
CCGACGATCC AGGCGCTTCC GGAGATGACT ACCGAACTCG AGTACCAGAC GATCGCCGGG 
CCGGGGGAGT ACTACCTCTT CTTCGAGACC TACGGCGGCG ATTTCGACGC GTTCGACCGC 
GTCGTCGCCG ACGATCCCAC GGTCTCGGAG CCGACGGTCG TCATCGACGG GGGCGAGTTC 
CGCGTCTACC GGATGCGGCT GACCTCGGCG GAACGGCTGG TGTTGCCCCG CGCTGCCGAA 
CTCGGAATGC GAGTCCTCCA TGCCTCGAGC GGTCACGGGG GCTGGATCGC GACCCTCGAG 
GTGCCCGAGC TTGACCGGTT ACAGGAATTT CGCGATCACT GTCGGAGCAA GGACGTCGCC 
TTCACCGTCG ACCGGCTCTA CCACGCCGAG GACGGCGACC GGAACCTGGG ACAGGGCTAC 
GGGCTGACGC CCGTTCAACA GGAGACGCTC GTCACCGCCT ACGAACGCGG CTACTTCGAG 
GACCCGCGGG AGTCCTCGGT CGAGGATCTC GCGGCCGCGC TCGGCGTCTC CTCGTCGGCC 
GTCAGCGGGC GCCTCCGCCG CGGGCTGAAG GCGCTGATCG AGAACTCGGT CATCCGCTGA
 
Protein sequence
MSEARVIAEI TLVHPELVLT PTIQALPEMT TELEYQTIAG PGEYYLFFET YGGDFDAFDR 
VVADDPTVSE PTVVIDGGEF RVYRMRLTSA ERLVLPRAAE LGMRVLHASS GHGGWIATLE 
VPELDRLQEF RDHCRSKDVA FTVDRLYHAE DGDRNLGQGY GLTPVQQETL VTAYERGYFE 
DPRESSVEDL AAALGVSSSA VSGRLRRGLK ALIENSVIR