| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Htur_0519 |
|---|
| Symbol | |
|---|
| ID | 8741100 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haloterrigena turkmenica DSM 5511 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013743 |
|---|
| Strand | + |
|---|
| Start bp | 550973 |
|---|
| End bp | 555571 |
|---|
| Gene Length | 4599 bp |
|---|
| Protein Length | 1532 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 646511097 |
|---|
| Product | multi-sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_003402090 |
|---|
| Protein GI | 284163811 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGATCGT CGTCCACTGA CGCGGATCAC CGCGCGCAGC TTCACCGGCA GGAGGTCGTC
GCCGACCTCA GCCAGCAGGC CCTCGAGACG GGGGATCTCG ACGGGGTACT GGCCGATGCG
GCGCTCGCTA TCACGGAGAC GCTCGATATC GAGTACTGTT CCGTGTTCGA ACTCCGACCC
GATCGAACGG CCGCCGTGTT GCGCGCCGGC GCCGGCTGGC CGACCGATCG ACTCGGGTCG
ACCACCGTGT CCGTGGAGCG GACCTCGTGG ACGGGCGACG CGGTTCGCGA GGCGGAGCCG
GTCGTTGCCG ACGATCTCGA CGCTGAGTCG CGGTTTTCCA TCCCAGAGGC GCTCACCGAT
CGCGACGTCG CAAGCGGCGT CGCCGTCCGC ATCGGCCCGG CGGAGCAGCC GTGGGGCGTC
CTCGGCGCGT ACGCGACCGA GAGCCACGCG TTTTTGGAGG CCGACGTCGA CTTCCTCGAG
CGCGTCGCGG ACGTCCTCGG ATCGGCGGTC GAACACGCCC GCACACGGCG TGACCTCGAG
CGAACGGAGC GCCGGTTCGA AGCGATCTTC GAGGATCCGA ACATCCTCGT GGGACTGCTC
GATCCGGACG GTACGGTCCG GGACATCAAC GGGACGGCGA TGGAGTACAT CGACGCTGAC
CTCGAGGACG TGACCGGCGA GTTGTTCTGG GAGACGCCGT GGTGGGGCGA GGGCAGCGAC
GCGCGGGACG ACGTCAAGCG GTGGACCGAG CGGGCGGCGG CCGGCGAGTA CGTCGAGTTC
GAGGCCGATC TCACGCGACC GGACGGCGAG TGGTACACCC TGAACGGCGC CTTCCGGCCG
GTCACGAACG AGGAGGGGGA GGTCGTCTCG GTGATCGTCT CCGACCGCGA CGTGACCGAG
CGCAAGGCCC GCGAGCGGGA ACTCGAGGAG TCCGAACAGC GCTACCGGAC GCTGGTCGAC
CACTTCCCCA ACGGCGCCGT CGCCCTCGTC GACGAGGACC TGACCTACCG GACCGTCGGC
GGGAGCCCGA CGGACACGGC CGACGCCACG GCCGATGAAA TCGAGGGCGA ACCGGTCGCC
GAGGCCGTTC CGCCGTCGCT GGCCGACGAA CTCGTCCCGC GCTACGAAGC CGCCCTCGAG
GGCGAGTCGA CCGCGTTCGA GACGACCGTG AACGGACGCG TCTACGACTT TCAGCTCGTC
CCGGTCCGGG ACGACGACGG CGAGGTGTTC GCCGCGCTCG GCATGTCACA GGACGTCACA
GAGCGTAGGA AGCGCGAACG TCAACTCGAG GAGTCCGAGC AGCGCTACCG GACGTTGATG
GAGTACTTCC CGAACGGGAT CGTGACGCTG TTCGACCTCG ATCTCCGGTA CGAACTGGCG
GCCGGGCGCG GATTCGACCG CATTCCCGTC GACCCCGCGG ACTTCGAGGG AAGCCACGTC
AGGGAGGTCT GGGACGACGA GGCCGCCGAC ACCCTGCAAC CGGTGTTCGA GGCCGCCCTG
GACGGCGAGG AGCAGTCGGT CGAACTCGAG TACAACGACC GCGTGTGGAT CGTGCGGGTG
GTCCCGATTA CCGACGAACG CGGCGATGTC TTCGCGGGCA TGACCATGGC CCAGGATATC
ACCGAGCGCA AGCGACACGA GCAGTACCTC CGGGAGACGA CGGCGCAACT CGAGGCCGCG
ACCGAAGCGG GCGCGGTCGG CACGTGGGAG TGGCGCGTTC CGGAGGACGA GATCGTCGCC
GGCGAGACGT TCGCCGAGAC GTTCGACGTC GATCCGCAGG CGGCCCGCGA GGGCGTCTCG
AGCGAGCGGT TCCTCGAGTC GATCCACGAG GACGACCGCG CCCGCGTCGA GGCGAAGATC
GAGGCAGCCT TCGAGTCCTG CGGGGAGTAC GAGGCGGAGT ACCGCGTCAG AACTGCCGAC
GGCGACCTCC GATGGGTCGT CGCCCGCGGT CACGTCGAAT GCGACGAGGA CGGGGACCCT
GTCAGGTTCC CCGGCGCGCT CACTGACATC ACCGAGCGGA AACACGCCGA GTTGGAACTG
CAACGGAACA ACGAGCAACT CGAGACGCTG TTCGACGTCC TTCCGGTCGG CGTCGTGGTC
GCAGACGCCG ACGGTCGGAT CCGCCAGGCC AACGATACCG CCAGGGAAAT CTGGGGCGGC
GACGTGTTCA ACACCGACAC CGTCGCGGAG TACGAGCGGT ATCCGGTGTG GTCGGCCGAT
TCCGGCGAGC GGATCTCGCC GGAGGAGATG ACGCTCGCGC GCGTCCTCGA CGGCGAGGAA
GTGACGGAAC CCGACATCTA CGAGATCGAA GCCGACGACG GCGAGCGCCG GATCGTCCGC
GTCGAGGGAA TGCCGGTCCG GAACGAGCGC GGCGAGGTGG CCCGCGGCGT CGTCACCCTC
ACGGACATCA CCGACCGCCG GGAGTCCCAG CGTCGCCTCG AGGAGTCCGA GCAGCGCTAC
CGGACGCTGA TCGACCACTT CCCCAACGGC GGGGTCGGAC TGTTCGACGA GAACCTCGAG
TACCAGATCA CCGGCGGCGA GGCGTTCGAC GAGATCGGCG CCTCCGCGGA CGATATCGTC
GGTCAGACGC TCTGGGAGCG GTATCCGTCC GAGATGGCGG AGCGCCTCGA GCCGAAGTTC
AGGGCCGCGC TCGAGGGCGA GGTCAGTTCC TTCGAGATGG CGTTTCACGA CCGGGATTGG
ATGGCGTACA CGGTTCCCGT CATGGACGAC GACGACGAGA TCTTCGGCGG GATGGTCATG
GTCCAGGAGA TCACCGAGCG AAAGGAGCGC GAGCGGAAAC TCCGCGAGCG CGAGCGTCGC
CTCGAGCAGT ACAAGGAGTA CATCGACGAG ATCCTCGACG CCATCGACGA CGTGTTCTAC
GTCATCGGCG AGGACGGCTC GCTACAGCGG TGGAACCGGA GCGTGACCGA CGTAACCGGC
TACTCAGACG AGGAGATCGC TGCGATGGAG CCGACGGACC TCTTTATCGA CGACGATGTC
GAGGACGCCC TCGCAGCCAT CAGAGCGGGA TTCGAAACGG GGTCGGTCAA CGTGGAACTG
ACGGTTCGGA CCAACGACGG CGACGCCGTC CCCTTCGAGT TCAACGCCTC GCGGCTCGAG
GATCCCTGGG GGAACACGGT GCTGGCCGGA ATCGGACGCG ACATCACCGA TCGGCTCGAG
CGCGAGAAAC ACCTCGAGCG GTACGAAACG ATCGTCGAGA CGGTCAATGA CGGCGTCTAC
GTCGTCGACG AGGACGGGCG CTTCACGATG GTCAACGAGA CGTACGCGTC GATGGTCGGC
TACGAACCGG ACGAACTCGT CGGCGAGCAC GTCTCGATGG TCGTCGACGA CGACGTCTCG
GCGCAGGTCC CGAAGCTAAT GGCCGAACAG ACCGATCGGC CGACGCTGGA GGCGACGGTC
CGAACGGCCG ACGGCGACCG AATTCCCGCC GAGGCGACGT TCGCGATGTT ACCCGAGGAC
GACAGCCGGT GGCACCGCGT CGGCGTCGTC CGGGACATTA GCGAGCGCAA GGAACGCGAA
CGCCGACTCG AGGAGTCGGA GCGCCGATAC CGGACGCTCG TCGAGAACTT CCCCGGCGGT
GCGGTGGGGC TGTACGACGA GGACCTCGAG TACATCGTCG TCGGTGGCGA GGCGTTCGAC
GACCTCGGCA TTGAGGAAGA CGAGGTCGCC GGGGCGACGG TCGACGAACG GTTTTCGGAC
GAGCTCGTCG CGGAGATCAG ACCGTACTTC CGGGCCGTGT TCGAGGGCGA GTCGAACACG
TTCGAGTATC AGGCCCACGG ACGGGACGTC TGGGCCCACA CCCTCCCCCT TCGAAACGAG
GACGACGAGA TCTTCGCGGG CATGGTCATG GCCCAGGACG TCACCGAACG CAAGGAGTAC
CAGCGCAAAC TCGAGGAGTC CAACGAGCGC TTAGAGCGGT TCGCCTACGC GGCCTCCCAC
GACCTCCAGG AACCGCTCCG GATGGTGACG AGCTACCTCA CGCTGCTCGA GAACCGGTAC
GCCGACGCCT TCGACGAGGA CGGGCGGGAG TTCCTCGAGT TCGCGGTCGA CGGCGCCGAT
CGGATGCGCG AGATGATCGA CGGCCTGCTC GAGTATTCCC GCGTCGAGAC GCGGGGCGAC
CCGTTCGAAC CGATGGATCT CGACGATATC GTCGACGACG TCCTCGAGGA CCTCCAGTTC
CGGATCGAGG AGACGGACGC CGAGCTCACC GTTGAGGACC TCCCGCGCGT CGAGGGCGAC
GCCAGCCAGT TGCGGCAGGT GTTCCAGAAC CTGCTGTCGA ACGCGCTCAC CTACAGCGGT
GACGAGCCGC CCCGGATTCA CGTCGGCGCC GAGCGCCGGG ATGACGAGTG GGTGATCTCG
GTCGCGGACG AGGGGATCGG CATCGATCCC GAGGATCAGG ATCGCGTGTT CACAATCTTC
GACCGCCTCC ACAGTCGCAG CGAGTACGAT GGGACCGGTA TCGGGCTGGC GCTCTGTGAG
CGGATCGTCG AGCGCCACGG CGGGGAGATC TGGGTCGACT CCGAACCCGG CGAGGGCTCG
ACGTTCTCCG TCGCCCTCCC CGCCTCCCGC GACTCGTAG
|
|---|
| Protein sequence | MGSSSTDADH RAQLHRQEVV ADLSQQALET GDLDGVLADA ALAITETLDI EYCSVFELRP
DRTAAVLRAG AGWPTDRLGS TTVSVERTSW TGDAVREAEP VVADDLDAES RFSIPEALTD
RDVASGVAVR IGPAEQPWGV LGAYATESHA FLEADVDFLE RVADVLGSAV EHARTRRDLE
RTERRFEAIF EDPNILVGLL DPDGTVRDIN GTAMEYIDAD LEDVTGELFW ETPWWGEGSD
ARDDVKRWTE RAAAGEYVEF EADLTRPDGE WYTLNGAFRP VTNEEGEVVS VIVSDRDVTE
RKARERELEE SEQRYRTLVD HFPNGAVALV DEDLTYRTVG GSPTDTADAT ADEIEGEPVA
EAVPPSLADE LVPRYEAALE GESTAFETTV NGRVYDFQLV PVRDDDGEVF AALGMSQDVT
ERRKRERQLE ESEQRYRTLM EYFPNGIVTL FDLDLRYELA AGRGFDRIPV DPADFEGSHV
REVWDDEAAD TLQPVFEAAL DGEEQSVELE YNDRVWIVRV VPITDERGDV FAGMTMAQDI
TERKRHEQYL RETTAQLEAA TEAGAVGTWE WRVPEDEIVA GETFAETFDV DPQAAREGVS
SERFLESIHE DDRARVEAKI EAAFESCGEY EAEYRVRTAD GDLRWVVARG HVECDEDGDP
VRFPGALTDI TERKHAELEL QRNNEQLETL FDVLPVGVVV ADADGRIRQA NDTAREIWGG
DVFNTDTVAE YERYPVWSAD SGERISPEEM TLARVLDGEE VTEPDIYEIE ADDGERRIVR
VEGMPVRNER GEVARGVVTL TDITDRRESQ RRLEESEQRY RTLIDHFPNG GVGLFDENLE
YQITGGEAFD EIGASADDIV GQTLWERYPS EMAERLEPKF RAALEGEVSS FEMAFHDRDW
MAYTVPVMDD DDEIFGGMVM VQEITERKER ERKLRERERR LEQYKEYIDE ILDAIDDVFY
VIGEDGSLQR WNRSVTDVTG YSDEEIAAME PTDLFIDDDV EDALAAIRAG FETGSVNVEL
TVRTNDGDAV PFEFNASRLE DPWGNTVLAG IGRDITDRLE REKHLERYET IVETVNDGVY
VVDEDGRFTM VNETYASMVG YEPDELVGEH VSMVVDDDVS AQVPKLMAEQ TDRPTLEATV
RTADGDRIPA EATFAMLPED DSRWHRVGVV RDISERKERE RRLEESERRY RTLVENFPGG
AVGLYDEDLE YIVVGGEAFD DLGIEEDEVA GATVDERFSD ELVAEIRPYF RAVFEGESNT
FEYQAHGRDV WAHTLPLRNE DDEIFAGMVM AQDVTERKEY QRKLEESNER LERFAYAASH
DLQEPLRMVT SYLTLLENRY ADAFDEDGRE FLEFAVDGAD RMREMIDGLL EYSRVETRGD
PFEPMDLDDI VDDVLEDLQF RIEETDAELT VEDLPRVEGD ASQLRQVFQN LLSNALTYSG
DEPPRIHVGA ERRDDEWVIS VADEGIGIDP EDQDRVFTIF DRLHSRSEYD GTGIGLALCE
RIVERHGGEI WVDSEPGEGS TFSVALPASR DS
|
|---|
| |