Gene Htur_0352 details

Gene Information

• Locus tag: Htur_0352
• ID: 8740919
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Haloterrigena turkmenica DSM 5511
• Kingdom: Archaea
• Replicon accession: NC_013743
• Strand: +
• Start bp: 373626
• End bp: 375455
• Gene Length: 1830 bp
• Protein Length: 609 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 646510919
• Product: DNA-directed RNA polymerase subunit B
• Protein accession: YP_003401926
• Protein GI: 284163647
• COG category: [K] Transcription
• COG ID: [COG0085] DNA-directed RNA polymerase, beta subunit/140 kD subunit
• TIGRFAM ID: [TIGR03670] DNA-directed RNA polymerase subunit B

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCAGCC AACAACGAGA CGCGAAAGTG TACGTCAACG GGTCGCTGGT GGGGACCCAT 
CCCGATCCGC ACGAGCTAGC CGAACAGATC CGCGAAGCGC GACGCATCGG TGACGTTTCC 
GAGATGGTCA ACGTCTCGGT GAAAGAGCGC ACCCGCGAAG TGATCGTCAA CGCCGACGCC 
GGCCGCGCGC GACGACCCCT GTTGGTCGTC GAGGACGGCG AACCGCGCAT CTCCCAACAG 
GAGATCGAGG CGCTGCAGGA CGGCGACCTC GAGTTCGACG ATCTCGTCGA CCACGGCTAC 
GTCGAATTCA TTGACGCCGA GGAGGAAGAG GACATCCTCG TGGCCGTCGA CGAAGAGCAC 
CTCACGGAGA AGCACACCCA CCTCGAGATC GACCCGTCGC TGATCTTCTC GATCGGTGCG 
GGGATGATTC CCTACCCCGA GCACAACGCT TCGCCGCGTA TTACGATGGG GGCAGGGATG 
ATCAAGCAGT CGCTGGGGCT CCCGTCGGCC AACTATCGAA TCCGGCCGGA CACGCGCCAG 
CACCTGCTGC ACTACCCCCA GCTCTCGATG GTCAAGACCC AGACCACCGA ACAGATCGGT 
TACGACGAGC GCCCCGCGGC GCAGAACTTC GTCGTCGCCG TGATGAGCTA CGAGGGGTTC 
AACATCGAGG ACGCGCTGGT CATGAACAAG GCCAGTGTCG AGCGCGCGCT TGCCCGGTCG 
CACTTCTTCC GGACCTACGA GGGCGAGGAA CGTCGCTACC CCGGCGGCCA GGAGGATCGC 
TTCGAGATCC CCTCCCAGGA CGTCCGCGGG GCTCGCGGCG AGGACGCGTA CAATCACCTA 
GACGAGGACG GTCTCGTGAA TCCGGAGACG ACGGTCGACG AGAACTCCGT CCTGCTCGGG 
AAGACCTCCC CGCCGCGCTT CCTCGAGGAA CCCGACGACA TGGGCGGACT CTCGCCCCAG 
AAACGCCGTG AGACCTCGGT GACGATGCGC TCCGGCGAAT CGGGCGTCGT CGACACCGTT 
ACCCTCATGG AGGGCGAGGA CGGCTCGAAG CTCTCGAAGG TCTCCGTGCG CGACGAGCGG 
ATCCCCGAAC TCGGGGACAA GTTCGCCAGC CGGCACGGTC AGAAGGGTGT CGTGGGCCAC 
CTCGCACCCC AGGAAGACAT GCCCTTCACC GAGGAGGGCG TCGTCCCCGA CCTCGTGCTC 
AACCCCCACG CCCTGCCCTC CCGGATGACC GTCGGCCACA TCTTAGAGAT GATCGGCGGC 
AAACTCGGCT CGATGGAGGG CCGGCGCGTC GACGGGACGC CGTTCCTCGG CGAGGACGAG 
GACGAACTCC GCGACGGCCT CGAGGACGCC GGCTTCGATT CGGCCGGCAA GGAGACCATG 
TACTCCGGGG TCACCGGCGA GAAGATCGAG GCCGAGATCT TCGTCGGCGT GATTTTCTAC 
CAGAAGCTCT ACCACATGGT CTCGAACAAG CTGCACGCCC GCTCGCGCGG GCCGGTGCAG 
GTGCTGACCC GCCAGCCGAC GGAGGGGCGC GCCCGCGAGG GCGGGCTCCG TATCGGGGAG 
ATGGAACGCG ACGTGTTCAT CGGCCACGGG GCCGCGATGA CGCTGAAAGA ACGACTGCTA 
GACGAGTCCG ACCGCGAGTT CATCCACATC TGTGCGAACT GTGGGATGAG CGCGGTCGAA 
AACGTCGAAC AACGGCGCGT CTACTGTCCG AACTGCGACG AGGAAACCGA TATCCACGAG 
ATCGAGATGA GCTACGCGTT CAAGCTCCTG CTGGACGAGA TGAAGGCGCT GGGTATCGCA 
CCGCGACTCG AACTGGAAGA CGCCGTCTAA 

 

Protein sequence

MSSQQRDAKV YVNGSLVGTH PDPHELAEQI REARRIGDVS EMVNVSVKER TREVIVNADA 
GRARRPLLVV EDGEPRISQQ EIEALQDGDL EFDDLVDHGY VEFIDAEEEE DILVAVDEEH 
LTEKHTHLEI DPSLIFSIGA GMIPYPEHNA SPRITMGAGM IKQSLGLPSA NYRIRPDTRQ 
HLLHYPQLSM VKTQTTEQIG YDERPAAQNF VVAVMSYEGF NIEDALVMNK ASVERALARS 
HFFRTYEGEE RRYPGGQEDR FEIPSQDVRG ARGEDAYNHL DEDGLVNPET TVDENSVLLG 
KTSPPRFLEE PDDMGGLSPQ KRRETSVTMR SGESGVVDTV TLMEGEDGSK LSKVSVRDER 
IPELGDKFAS RHGQKGVVGH LAPQEDMPFT EEGVVPDLVL NPHALPSRMT VGHILEMIGG 
KLGSMEGRRV DGTPFLGEDE DELRDGLEDA GFDSAGKETM YSGVTGEKIE AEIFVGVIFY 
QKLYHMVSNK LHARSRGPVQ VLTRQPTEGR AREGGLRIGE MERDVFIGHG AAMTLKERLL 
DESDREFIHI CANCGMSAVE NVEQRRVYCP NCDEETDIHE IEMSYAFKLL LDEMKALGIA 
PRLELEDAV