Gene Htur_0270 details

Gene Information

• Locus tag: Htur_0270
• ID: 8740834
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Haloterrigena turkmenica DSM 5511
• Kingdom: Archaea
• Replicon accession: NC_013743
• Strand: -
• Start bp: 289929
• End bp: 291809
• Gene Length: 1881 bp
• Protein Length: 626 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 646510834
• Product: PAS/PAC sensor signal transduction histidine kinase
• Protein accession: YP_003401844
• Protein GI: 284163565
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase)
• TIGRFAM ID: [TIGR00229] PAS domain S-box

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTGAAC GGATCGAGTC CGATGCTCAG TCGGAAGTGG GGTATCCCGC AACCGGGTCT 
GAGACGCTGA CGTATAGCCC GGAGTTGCGT GGCTCAGCCC CTTCTCTCGA TGCCCACGAA 
CACGCTAACG ATCACTTTGC GCTTATTTAC GAGTCCCGAG AGGAGCAGTT CGCGGCCGCT 
ATCCCGTTCA TCCGCAAAGG ACTCGAACGG GACGAGCGGT GCCTGTACAT CACGTACGAG 
AATACCAGAG CGGAGGTCAT CGAAGCGATG CGGGCCTACG ATATCGATGT CGATACGGCC 
CTCGACTCGG GACAGCTCTC CATTCACGAC GAAGAGGAGA CCTACCTCCG CAACGAGACG 
TTCGACGCGG ACGAGACGCT CGAGTTCATC GACGCTGCTA TCGAGGACGC CACCGAAGAG 
TACGAGGCGC TCCGCATGAC CGGCGAGATG AGCAGCGTCT TAGAAGAGGA TCCCGACGGC 
GAGGAACTCG TCAAATGTGA GGCGAAGGCA AATTATCTCT TCGACGATGC GGACGGCATC 
GCGCTCTGTC AGTACAATCG CGAGCGGTTT CCCGCGGACG TGATCCGCGA CGTCATCAGC 
ACTCATCCGC TCCTCATCCA CGATAACCGG ATCAGTAGCA ACGTCTACTA CACGCCACCG 
AAGGAATTCT TCGGCCCCGA GAAGGCGGAC TGCGAGGTCG ACCGCCAACT GGGTATGCTC 
CGAGAGCAAA CCGACGTGAA AGACAGACTT TCCAAGCGCG AGCAACGCCT CCGGGAGCTG 
GCGGAAGACC TCCAAGAAAA CGAAGAACGA CTGCAGCTCG CGCTCGAGGC CGGAGAAATG 
GGCATGTGGG AACTCGACCT GCAGACGAAA GACTCGCCCA TCCGATCACG TCAGCACGAT 
CGCATCTTCG GCTACGAGGA ACCGATCGAG GAGTGGACCT TCGAGACGTT TCTCGATCAC 
GTTCACCCGG ACGACCGTGA GAACGTGGAA CGATCCTTCG AGCAGGCCTT CGAGGCGGGT 
AAATGGGAGT TCGAGTGTCG GATCATCAGA ACCGACGGTG AGGAGCGCGA AATTTCGGCT 
CAAGGAGCGT TCCACTCCGA CGACGAGGGG GACCCAGTGC GTGCGGTCGG GGTCGTCCGA 
GACGTCACGG ATCGCAAAGA ACGCGAGCGA CAGCTCAGGG AGTTAGTCGA GCGACTGGAG 
GAGTCGAACG AACGCCTCGA GCAGTTCGCC TATGCGGCCT CGCACGACTT ACAGGAGCCG 
CTGCGGATGG TGTCGAGCTA TCTACGGCTC ATCGAGAACC GATACGGCGA CGCGTTCGAC 
GAAGACGGCG AGGAGTTTCT CGAGTTCGCG GTCGAGGGTG CCGACAGGAT GCGGGAGATG 
ATTCAGGGGC TGCTCGAGTA CTCTCGAGTC GAGGCCGAGG GTGAACCCTT TCAGGCGGTC 
GATCTCAATG TAGTGCTGGA AGATGTCTGC GAGGACCTCC AGCTCCGGGT CGACGACAGC 
GGTGCCGAAA TCACCAGCGA ACGGTTACCC ACCGTAGAGG GCGATGCCAA CCAGCTTCGA 
CAGGTATTCC AGAACTTACT GTCCAACGCT ATCGAATACA GCGGCCAGGA ACCACCGCGA 
ATTCACGTCT CCGCCGAACG CGATGGAGCG AAATGGATAC TCTCGGTACG CGACGAGGGG 
ATCGGGATCG ATCCCGACCA TGCCGACCGC ATCTTCGAGG TCTTCGAGAG CCTCCACACG 
AACGACGAAC ACGCTGGAAC CGGAATCGGG CTCGCGCTCT GTGAACGTAT CGTCGAGCGC 
CACGGGGGAG ACATCTGGGT CGAATCTACG CCGGGTGAGG GATCGACGTT CTCTGTTACG 
TTGCCCGACC CGGAAGCGTA A 

 

Protein sequence

MSERIESDAQ SEVGYPATGS ETLTYSPELR GSAPSLDAHE HANDHFALIY ESREEQFAAA 
IPFIRKGLER DERCLYITYE NTRAEVIEAM RAYDIDVDTA LDSGQLSIHD EEETYLRNET 
FDADETLEFI DAAIEDATEE YEALRMTGEM SSVLEEDPDG EELVKCEAKA NYLFDDADGI 
ALCQYNRERF PADVIRDVIS THPLLIHDNR ISSNVYYTPP KEFFGPEKAD CEVDRQLGML 
REQTDVKDRL SKREQRLREL AEDLQENEER LQLALEAGEM GMWELDLQTK DSPIRSRQHD 
RIFGYEEPIE EWTFETFLDH VHPDDRENVE RSFEQAFEAG KWEFECRIIR TDGEEREISA 
QGAFHSDDEG DPVRAVGVVR DVTDRKERER QLRELVERLE ESNERLEQFA YAASHDLQEP 
LRMVSSYLRL IENRYGDAFD EDGEEFLEFA VEGADRMREM IQGLLEYSRV EAEGEPFQAV 
DLNVVLEDVC EDLQLRVDDS GAEITSERLP TVEGDANQLR QVFQNLLSNA IEYSGQEPPR 
IHVSAERDGA KWILSVRDEG IGIDPDHADR IFEVFESLHT NDEHAGTGIG LALCERIVER 
HGGDIWVEST PGEGSTFSVT LPDPEA