| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Htur_0226 |
|---|
| Symbol | |
|---|
| ID | 8740789 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haloterrigena turkmenica DSM 5511 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013743 |
|---|
| Strand | - |
|---|
| Start bp | 247522 |
|---|
| End bp | 248406 |
|---|
| Gene Length | 885 bp |
|---|
| Protein Length | 294 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 646510789 |
|---|
| Product | TPR repeat-containing protein |
|---|
| Protein accession | YP_003401800 |
|---|
| Protein GI | 284163521 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3063] Tfp pilus assembly protein PilF |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTGACC GAGAAGGCGA TCGCGAGGGC GATCACCGAT TCTCCGACGG CGAGGGATTC
GACGACGCCT ACGAGGAGTT CGATCTGGAC CCGCCGGAAC TGGCCGTCGA CCCGGGGAAG
GTCGACCCCA TCGACTCGCG AGTCGTCACC GACACCCTCG ACGATCAGAA CATCGCCACG
GACGACGTCG ACGCCACGGA GTTGCTCGAC GTCGGGCTGA ACTACATGCA GATCAACCGC
TACGAACAGG CCACCGACGC CTTCGAGCGG ACCGCCCAGT TCGCCGAGGA CGAGCGCTTA
GAGCAGGAGG CGTGGGTGAA CAAAGGCGTC GCCCACGCCG AACTCGAGGA GTACGACGCG
GCGATCGGCG CCCACCGCGA GGCCATCAAC ATCGACGACT CGAGCGAGCA CGCGGCGACC
GCCGAAACCA ACCTCGCGTA CGCGCTCTGG GAGTTCGGCG AGACCTCCCA GGCCTTAGAC
CACGCCGAGC GGGCCGTCGA GATCGACGAC CGGTTCGCCG AGGGGTGGTA CAACCGCGCG
TTCTTCCTCT CGGAACGCGG ACTGGCCGAG GAGGCCTTAC ACTGCATCGA CAACGCCATT
CGGCTGGGTA TGCGCAACTC GAAAGTCCTT GAGGAAAAGG CCGAGATCCT CGAGGAACTC
GGCGAGTACG ACGAGGCCGA GGAGATCGCC GACGAGGCCA TCGAGATGCG CGAGCGCGCC
GAACAGCGCG TGATGGAAGA GCGCAAGGAG ATGCAAGGCG AGTCACTCGG CGGTCCCCAG
TCCCAATCTC AGCCCCAGCG CGGACAGGGC CGACAGGGCG GGTTCGACAT CGCCGATCCC
GGTCAGGCGT CCGACCGCGA CGAGGAAGAC TGGCGGCTCG AGTAA
|
|---|
| Protein sequence | MTDREGDREG DHRFSDGEGF DDAYEEFDLD PPELAVDPGK VDPIDSRVVT DTLDDQNIAT
DDVDATELLD VGLNYMQINR YEQATDAFER TAQFAEDERL EQEAWVNKGV AHAELEEYDA
AIGAHREAIN IDDSSEHAAT AETNLAYALW EFGETSQALD HAERAVEIDD RFAEGWYNRA
FFLSERGLAE EALHCIDNAI RLGMRNSKVL EEKAEILEEL GEYDEAEEIA DEAIEMRERA
EQRVMEERKE MQGESLGGPQ SQSQPQRGQG RQGGFDIADP GQASDRDEED WRLE
|
|---|
| |