| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Htur_0203 |
|---|
| Symbol | |
|---|
| ID | 8740766 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haloterrigena turkmenica DSM 5511 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013743 |
|---|
| Strand | - |
|---|
| Start bp | 221614 |
|---|
| End bp | 222822 |
|---|
| Gene Length | 1209 bp |
|---|
| Protein Length | 402 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 646510766 |
|---|
| Product | NMD3 family protein |
|---|
| Protein accession | YP_003401777 |
|---|
| Protein GI | 284163498 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1499] NMD protein affecting ribosome stability and mRNA decay |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGAGT CGCGTGCGTT CTGTCCCCGG TGTGGGGACC CCGTTCCTGA ACGGTCGGCG
AGCGACGCAG ATGGCGAACC CGCGAACGAT CCCCTCCGCC CCGGCGCCGA GGTCGAACTC
TGCGATTCGT GTTACTTCGA GGGCTTCGAC TTCGTGGACG CACCGGATCG GATCGACGTC
CGGGTCTGTG CCCAGTGCGG CGCGGTCTAC CGCGGGAATC GGTGGGTCGA CGTCGGCGCG
CAGGATTACA CCGACATCGC CATCGAGGAG GTCAGCGAGG CGCTGGCCGT CCACGTCGAC
GTCGAGGACG TCGCCTGGCA GGTCGAGCCC GAACAGATCG ACGAGAACAC CATCCGGATG
CACTGTTACT TCACGGGCGT GGTCCGCGGA ACGCCCGTCG AGGAGCAGGT GATGGTCCCC
GTTAAGATCG CCCGCCAGAC TTGCCTGCGC TGTGGGCGGA TCGCCGGCGA CTACTACGCC
AGCATCGTCC AGATCCGCGC CGAGGAGCGG ACGCCGACGA CCGACGAGAT GGACCGCGCG
AAGGAGATCG CCAACACCGT CGTCGCCGAC ATGGAGGCGA CCGGCGACCG CAACGCCTTC
GTCACCGAGA TGGGCGAGGT CGACGAGGGG CTGAACATCA AGGTCTCGAC CAACAAGATC
GGCAAGAAGA TCTCGAACAA GATGGTCGAG GAGTTCGGCG GCACCGTCAA CGACGCCGAG
ACGCTCGTGA CGGAGGACGA GGACGGCAAC GAGGTCTATC GAGTCACCTT CGCCGTCCGC
CTTCCGCCGT ACACCCCCGG CGACGTCATC GAGCTCGCCG ACGACGACGG CGGCCCCGTG
ATCGTCCGCA GCGCCCGCGG CAACCTCAAG GGCGTCCGCG CGACGACCGG CGAGCGCTAC
GAGGCCAGTT ACGAGGAGGG CAACGCCCCC GACGCCCGGA AACTCGGCGA CCTCGAGGAC
GCCGTCGAGG CTACGGTCGT CACCGTCGAG GACGAGAACG CCGTGCAGGT GCTCGATCCC
GAGACCTACC GGGCGACGAC CGTCTCCCGG CCGGACTACT TCGATCCCGA GGCCGAGACG
GTGCCCGTGC TGAAGAGCCG CGCCGGGCTA CACGTACTGC CCGATCCCGA CCCCGACACG
GGCGACGAGG GGGAAGACGA ATCCGGACAC TACGATCCGT ACGCGAACCG CGACGAGGAC
GATGCCTGA
|
|---|
| Protein sequence | MSESRAFCPR CGDPVPERSA SDADGEPAND PLRPGAEVEL CDSCYFEGFD FVDAPDRIDV
RVCAQCGAVY RGNRWVDVGA QDYTDIAIEE VSEALAVHVD VEDVAWQVEP EQIDENTIRM
HCYFTGVVRG TPVEEQVMVP VKIARQTCLR CGRIAGDYYA SIVQIRAEER TPTTDEMDRA
KEIANTVVAD MEATGDRNAF VTEMGEVDEG LNIKVSTNKI GKKISNKMVE EFGGTVNDAE
TLVTEDEDGN EVYRVTFAVR LPPYTPGDVI ELADDDGGPV IVRSARGNLK GVRATTGERY
EASYEEGNAP DARKLGDLED AVEATVVTVE DENAVQVLDP ETYRATTVSR PDYFDPEAET
VPVLKSRAGL HVLPDPDPDT GDEGEDESGH YDPYANRDED DA
|
|---|
| |