Gene Htur_0150 details

Gene Information

• Locus tag: Htur_0150
• ID: 8740713
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Haloterrigena turkmenica DSM 5511
• Kingdom: Archaea
• Replicon accession: NC_013743
• Strand: +
• Start bp: 161392
• End bp: 167301
• Gene Length: 5910 bp
• Protein Length: 1969 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 646510713
• Product: putative PAS/PAC sensor protein
• Protein accession: YP_003401724
• Protein GI: 284163445
• COG category: [R] General function prediction only
• COG ID: [COG3413] Predicted DNA binding protein
• TIGRFAM ID: [TIGR00229] PAS domain S-box

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTCAGTC GTTCGTCACG CAGCGCCACC CTCGACGGGT CTCTCGGCCG GCGGCGGTCG 
CCAGGCTTCC TCGGGGTAAT TCTCGTCGGT ACGCTACTCC TCTGTCTCGG ACCGCAACTC 
CACGGCTCGT CGATCGTCCC GCTCCCGTTC ATCCTCGGGT TGGCCGCTCG CGGCGGCGCC 
GACCGGGAAC CCACACTCGA GCGCCTCGCG GGCGAGCTCG AGACGTTCGT CTCGCGGGTT 
CGCGACGGCG AGGTCAACGA GGCGATCGCC GATCCCGACG CGGACGCCGA AGGCGTCGAC 
TTCGAACTCG ACCGCGACGA CGCCCTCGGT CGGCTCTCGA CGGCGATCGA CGAGCTGACA 
ACGGCGGTCC GGGAGCGAGA ACGCCGGTTC GGGGAGCGCG AACGAGAACT CCGGGAGACG 
AACGAGCGCC TCGAGGCGGT GATCGAGGCC TCGCCGGCGG CGCTGGTCGC GCTCGATACC 
GACGAGACGG TGACGCTGTG GAACCCCGCC GCCAAGCGCA TCTTCGGCTG GAGCGAGGCG 
GAGGTGCTCG GCGAATCGCT GCCGTTCGTT CCGGACGACC GGGCCGAAGG CCACCGCGAG 
ATCTTCGACC GACTGTTCGA GGGCGAGTCG ATCGCCGGGC TCGAGACCCA GCGGGTGACG 
AAGGCCGGCG AGCGGATCGA CGTGAGTATC TCCGCCGCCC CGATCTACGG CGCCGACGGC 
GAGATCGTCG GCACGATGGG CGCGATCGAG GACATCACCG ACCGCAAGGA ACGGGAACGC 
CGACTGGAGG CGACGAGCGC GCGCCTCGAG GCGCTGTTCG AGCGCTCGCC GGACATGATC 
GACGTGCTCG ATACCGAGGG CGCGATAGTC GGGGCGAATC AGCGGCTCTG CGACAAACTG 
GGATACACCG AGTCGGAACT GGTCGGCACG AAGATCTGGG AGCACGCGAA ACTGTTCGAC 
GCCGGCGAGG TCACGGCGCT GCTCGACGAC GTCGAGACGG GCGAGCGACG TAAGTTCGAG 
GATCGATACC GGCGCCACGA CGGAACGACG TTCCCAGTCG AGGTCCACCT GATTCGACTT 
GATCTCGCCG AGGAGAACCG CTTTCTGGCG ATCAGTCGTG ACATCTCGGA CCGAAAAGCA 
CGCGAGCGGG ACCTCCGGGA GACGAAACGA CGGCTGGAAC TCGCGCTGGA GGGGACGAAC 
ACGGGCGTCT GGGAGTGGCG CCTCGACAGC GACAACGTGA GCTGGGACGA GACGTCGGAG 
GCGTTTATCG GCCTTGAAGC GGGCGAGCTC GAGGAGAGCT ACGAGGCCTT CAGGCAGCGC 
GTCCACCCGG ACGATTGGCC CCGCGTCGCG GCGGCGCTCG AGCGGGCGGT CGACGGCGAC 
GAGCTGTATC AGGCGGAGTT CCGGATGCGA CACGAGGGAG GGGACTGGCG CTGGTTCGAG 
TCCCGCGGTC GGGTCGTCGA CGACGACGGG GTGACGCGCC TCGTCGGGAC TCGCAACGAT 
ATCACCGACC GCAAGGAGCG CGAACGGGAG CTCGAGCGGT ACAGGGAGTA CACCGACGAC 
CTCCTCGACG CCGTCGACGA CGTGTTCTAC GTCCTCGACG CGGACGGCGA CCTCCAGCGG 
TGGAACGAGA GCCTCTCCGC GGTGACCGGC TACGCGGACG CCGAGATCGA GTCGATGGAC 
GCGCTCGATT TCTTCGCCGA GGCGGACCGC GCGACGATCG CCGACGCCAT CGCGGAGGTG 
CTGGAGACCG GTTCGACGCG GGTCGAGGCA CCGATCCAGA CCGTCGACGG GGAGACGATC 
CCCTACGAGT TCGTCGCGAC GAGACTCGAG GATCTGGACG GCAACACCGT CGTGACCGGG 
ATCGCCCGCG ACATCTCCGA GCGGAAACGG TACGAGCGCG ACCTCGAGCG GACGACCGAA 
CTGCTCGAGC AGGCCCAGCG ACTGGCGTCG GTGGGCGGCT GGGAACTCGA TGTCCGCGAG 
GAGCCCTTCG AGGCGATGGC CTCCGACGAG TTCTACCGGC AACTCGGCCT CGAGCCGGGG 
ACGACGCTGA CGCCGGCCGA CGCGATCGAA CGGTTCCATC CCGACGACCG GCCGGCGCTA 
CGGGCCGTGA TCGAGGCCGC GATCGAGGAC GGCGAGAGCT ACGATCTCGA GGCGCGAGTG 
CGACTGGACG ACGGCGAGGA GCGGTGGGTT CGTGCGATCG GCGAACCCGT TCGCGACGGC 
GCCGACGAGA TCGTCGCCGT CAGGGGATCG ATGCAGGACG TCACGGAGGG GAAGGCCCGA 
GAACGAGACC TCGAACGAAC GACGCGACTG CTCGAGCAGT CCCAGCGACT GTCCAACGTC 
GGCGCCTGGG AGCTCGACGT CCGCGAGGAA TCGCCCACCG TCCAGTGGAC CGACGAAGTG 
GCCCGGATCC ACGGGCTCTC GCCGGAAGCC GACGTCGACC TCGAACACGC GGTGGAGTTC 
TACCATCCGG AGGATAGAGA CGAGGTTCGG GCGGCTATCG AGCGGGCGAT CGAGCGCGGC 
GAGAGCTACG ACCTCGAGGC CCGGATCGAA CCGGCCGACG ACTCCGATCG GCGCTGGGTT 
CGGACGATCG GCGAACCCGT CTCCGAGGAC GGACGGGTCG TCAAACTCTA CGGATCGCTG 
CAGGACGTTA CCGACCGTAA GGAGCGCGAA CGGGACCTAC AACGATACGA GACGATCATT 
CAGGCGATCG GCGACCCGGT CTACACGCTC GACGAATCGG GGAGGGTTCA GTTCGTTAAC 
GACGCCATCG AGACGCTCGC GGGATACGAT CCCGACGCGT TGATCGGTGA CGACGTCTCG 
GAGCTCCTGC CGCCCCCGGA CCTCGAGCGG GCCCGCGAGC AGGTGCGCGA GCTGCTCCGG 
GAGGACGAAC CGTACGGGAC CGTCGAGACG AACTTCGCCA CGGCCGACGG CGACGTGATC 
GAGACGGAAA CGCACGTCGC CCTGTTGCCG ATGGACGACG GCGAGTTCGC GGGCACGGCG 
GGGGTCGTCC GCGACATCAC CGAGCGCAAG GAACGCGAGC GCGAACTCGA GCGCTACGAG 
ACGATCATTC AGGCGATCGG CGATCCGGTC TACACGCTCG ACGCGTCGGG GACGTTCCGG 
TTCGTCAACG ACGCGATCGA GTCGCTCTCG GGGCACGATC CCGAGACGTT GATCGGGGCG 
GACGTCGCGA CCGTGATGTC CCCCGAGAAC CTCGAGACCG CCCGGGAACT AGTCCGGGAA 
CTGCTCCGGG AGGGAAAGCC CTACGAGACC TTCGAGATGG ATCTCGAGAC CGCCGACGGC 
GACGTGATCG AGGCGGAAAA CCACATGGCG CTGTTGCCGT CCGAGGACGG CGAGTTCGCG 
GGCACGGCGG GGGTCGTCCG CGACATCACC GAGCGCAAGG AACGCGAGCG CGAACTCGAA 
CGGACGACCG AACTGCTCGA GCAGGCCCAG CGGATCGCCG GCGTCGGCGG CTGGGAACTC 
GACGTGACGA CCGAGCCCTA CGAGCTGACG CTGACGCCGC AACTCGAGCG ACTGTTCGGT 
CGGGTGGGTC GAGCGGAAAC GCTAGACGTG GAAGACGCGG TCGAACTCTA CCACCCCGAC 
GATCGGTCGC GGGTCCTGTC GGCCGTCGAT GACGCGGTCG AACACGGCGA GAGCTACGAT 
CTCGAGGTGC GGATGCACAC GCCCGACGAC GAGATACAGT GGGTGCGGAC GATCGGCGAA 
CCCATCGCTG ACGACGGCGA GGTCGTCGCC GTCCGCGGCT CGATTCAGGA CATTACCGAC 
CGCAAGCGAC GCGAACGCGA ACTCGAGCGA ACGACGGACC TACTCGAGCG GGTCCAGCGG 
ATGGCGTCGA TCGGCGGCTG GGAAGTGAAC GTCCGAGCCG ACCCGTCGAC GTCGACCTGG 
ACCGACGAGA TGTATCGGCT CCACGACCTC CCGTCCGACG TCACGCCCGA CCTCGAGCAG 
ACGATCGAGT GTTACCATCC CGACGATCGA GCGTTCGTCC GCGAGCAAAT CGAGGCGGCC 
ATCGAGACGG AGACGGGGTA CGATCTCGAG GCCCGGATTC GGACCAGCGA AGGCGAGATC 
AGGTGGGTTC GTGCGATCAG CGAACCGATC CGAGACGAGG CCGGCGAGCT CCACAAGTAC 
CGGGGCACGG TCCAGGACAT CTCCGACCGC AAGCGCCGGG AGCTGGCCCT CGAGTCGCTC 
CACGAGACCG CTCGGGGACT ACTCAACGCC GAGACGGAGT CGACGGTCGC CGATCTGGTC 
GTCGATACGG CCGCCGACCT GCTCGAGACC GGCGACGTCG GCGCCGGCGT CTACCTGCTC 
GACTCCGAGA CCAACCGGTT CGAACCGGTC TCGTCGACGG CCAACTTCGC CGATCGGTCC 
GGCGGCGCAC CGTCCGTCGC GGTCGGTGAC GGCGACTCCG TGCTCTGGAC GACCTACGTG 
ACGGGCACCC AGACCGTCGT CGACGACGCC GAGATCGGCG ATCGATCGCC GCTGTTCGGC 
GGCGACGCCC CCGGCGGACT GCTCGTTCCG ATCGGCGACT ACGGCGTCTT CGTCCTGCTG 
GCCTCGCCCG CGACGATCGA CGACGAAACC CGCCGGCTGT TCGAGACGCT CGTCGCGACC 
ACCGAAGCGG CCTTCGACCG CCTCGAGAGC GAGGCGAACC TCCGGGAGCG CGACGCGGAG 
CTGGCGGCCC AGAACCGGCG GTTGCGCCGG CAGATCCAGA TCACGGAGAT CATTCGCGGG 
ATCGACCGGT CGCTCATCGG CGCCGACGGC CGCGACGAGA TCGAGCGGAC CGTCCCCGAG 
CGACTCGTCG CGGCCGACAA CGTCTCTTTC GCCTGGATCG GCGACCTCGA CGCGAGCGGC 
TCGACCCTCG AGGCGCGCAC CTGGGCCGGC GACGAACCGG AGTATCTGGA CGCGGTCGAT 
TTCGGTCTCG AGGGCGAGTC TCAGGAGCCC GCGGTCCGAG CCGCCCGGAC GGGATCGCCG 
ACGGTCGTCG AGAACGTCGT CGAGGACTTC CAGGGGGAGG CGTGGCGAAC GAACGCCCTC 
GACGCAGGCT TCCAGTCGGC CATCGCCGTC CCGCTCACGT TCGAGGAGTA CAGCTACGGC 
GTCCTGACGG TCTACGCCGA CGAACCCGAC GCGTTCACCG ACTTAGAGCG CTCGGTGTTC 
GCCGAACTCG GCGAGGGGAT CGCGAGCGCG ATCAACGCGG CCCAGACCCG GGAAGCCCTC 
CACGCCGAGA CGCTCGTCGA ACTGACCCTC GACCTCGAGA CCGACGACGT CCTGTCGCGG 
ATCGCGACGG CGACCGGCGC CGCGGTCACC TACGAGGGTC TGGGCACTCA CGGCGAGTCG 
GAGGCCGTCA TCTTCTTCGA GACTCGAGGG GCGTCGGCCG AGGCCGTCCG CGACGTGCTC 
GACGACCTCG TTTCCGTGAC GTCCGCGCGC CTCGTCACCG AATCCGACTC GCGCTGTCTG 
TTCGAGGCGA CCGTCACGGG CGACGTCCTC GCCACGCGGC TGGTCCGCCA CGGCGGGAGT 
CCGCGGTCGA TCGCGGTCGA CGAGGGCCGG ACCGAGGTCA CCGTCGACGT CCCCGTGACG 
ACCGACGTTC GCGAGTTCGT CGAGATGCTA CGGGATCAGT ATGAGCGCGT CGACCTCCGA 
TCTCGCCGGC ACGTCCAGCG GACGATGCAC ACCCGCCAGG AGCTGGTGAC GTCGCTATTC 
GAGGACCTGA CCGACCGTCA GCTCGAGGTG CTTCGGACGG CGTATCTGGC CGGCTTCTTC 
GAGTGGCCCC GCGAGAGCAC CGGCGAGGAG ATCGCCGAGA TGCTCGAGGT GACCCAGCCG 
ACGGTCAACC GTCACCTCCG GATCGGCCAG CAGCGGCTGC TGGAGCGCCT GTTCGACGAC 
GAGACGCTCT CGGTCGCCGA CGGCTCCTGA 

 

Protein sequence

MVSRSSRSAT LDGSLGRRRS PGFLGVILVG TLLLCLGPQL HGSSIVPLPF ILGLAARGGA 
DREPTLERLA GELETFVSRV RDGEVNEAIA DPDADAEGVD FELDRDDALG RLSTAIDELT 
TAVRERERRF GERERELRET NERLEAVIEA SPAALVALDT DETVTLWNPA AKRIFGWSEA 
EVLGESLPFV PDDRAEGHRE IFDRLFEGES IAGLETQRVT KAGERIDVSI SAAPIYGADG 
EIVGTMGAIE DITDRKERER RLEATSARLE ALFERSPDMI DVLDTEGAIV GANQRLCDKL 
GYTESELVGT KIWEHAKLFD AGEVTALLDD VETGERRKFE DRYRRHDGTT FPVEVHLIRL 
DLAEENRFLA ISRDISDRKA RERDLRETKR RLELALEGTN TGVWEWRLDS DNVSWDETSE 
AFIGLEAGEL EESYEAFRQR VHPDDWPRVA AALERAVDGD ELYQAEFRMR HEGGDWRWFE 
SRGRVVDDDG VTRLVGTRND ITDRKERERE LERYREYTDD LLDAVDDVFY VLDADGDLQR 
WNESLSAVTG YADAEIESMD ALDFFAEADR ATIADAIAEV LETGSTRVEA PIQTVDGETI 
PYEFVATRLE DLDGNTVVTG IARDISERKR YERDLERTTE LLEQAQRLAS VGGWELDVRE 
EPFEAMASDE FYRQLGLEPG TTLTPADAIE RFHPDDRPAL RAVIEAAIED GESYDLEARV 
RLDDGEERWV RAIGEPVRDG ADEIVAVRGS MQDVTEGKAR ERDLERTTRL LEQSQRLSNV 
GAWELDVREE SPTVQWTDEV ARIHGLSPEA DVDLEHAVEF YHPEDRDEVR AAIERAIERG 
ESYDLEARIE PADDSDRRWV RTIGEPVSED GRVVKLYGSL QDVTDRKERE RDLQRYETII 
QAIGDPVYTL DESGRVQFVN DAIETLAGYD PDALIGDDVS ELLPPPDLER AREQVRELLR 
EDEPYGTVET NFATADGDVI ETETHVALLP MDDGEFAGTA GVVRDITERK ERERELERYE 
TIIQAIGDPV YTLDASGTFR FVNDAIESLS GHDPETLIGA DVATVMSPEN LETARELVRE 
LLREGKPYET FEMDLETADG DVIEAENHMA LLPSEDGEFA GTAGVVRDIT ERKERERELE 
RTTELLEQAQ RIAGVGGWEL DVTTEPYELT LTPQLERLFG RVGRAETLDV EDAVELYHPD 
DRSRVLSAVD DAVEHGESYD LEVRMHTPDD EIQWVRTIGE PIADDGEVVA VRGSIQDITD 
RKRRERELER TTDLLERVQR MASIGGWEVN VRADPSTSTW TDEMYRLHDL PSDVTPDLEQ 
TIECYHPDDR AFVREQIEAA IETETGYDLE ARIRTSEGEI RWVRAISEPI RDEAGELHKY 
RGTVQDISDR KRRELALESL HETARGLLNA ETESTVADLV VDTAADLLET GDVGAGVYLL 
DSETNRFEPV SSTANFADRS GGAPSVAVGD GDSVLWTTYV TGTQTVVDDA EIGDRSPLFG 
GDAPGGLLVP IGDYGVFVLL ASPATIDDET RRLFETLVAT TEAAFDRLES EANLRERDAE 
LAAQNRRLRR QIQITEIIRG IDRSLIGADG RDEIERTVPE RLVAADNVSF AWIGDLDASG 
STLEARTWAG DEPEYLDAVD FGLEGESQEP AVRAARTGSP TVVENVVEDF QGEAWRTNAL 
DAGFQSAIAV PLTFEEYSYG VLTVYADEPD AFTDLERSVF AELGEGIASA INAAQTREAL 
HAETLVELTL DLETDDVLSR IATATGAAVT YEGLGTHGES EAVIFFETRG ASAEAVRDVL 
DDLVSVTSAR LVTESDSRCL FEATVTGDVL ATRLVRHGGS PRSIAVDEGR TEVTVDVPVT 
TDVREFVEML RDQYERVDLR SRRHVQRTMH TRQELVTSLF EDLTDRQLEV LRTAYLAGFF 
EWPRESTGEE IAEMLEVTQP TVNRHLRIGQ QRLLERLFDD ETLSVADGS