| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Htur_0112 |
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| Symbol | |
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| ID | 8740675 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haloterrigena turkmenica DSM 5511 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013743 |
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| Strand | - |
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| Start bp | 120566 |
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| End bp | 123271 |
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| Gene Length | 2706 bp |
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| Protein Length | 901 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 646510675 |
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| Product | TRAP transporter, 4TM/12TM fusion protein |
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| Protein accession | YP_003401686 |
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| Protein GI | 284163407 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4666] TRAP-type uncharacterized transport system, fused permease components |
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| TIGRFAM ID | [TIGR02123] TRAP transporter, 4TM/12TM fusion protein |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTATAG ATACGAGCGG TACGGACACG GTTTCGGACG AACAGACAGA CGAGGTACTT
GAGGAAATCG AGCGGCGGCG GACGCTTCGA GGACCCGCGG CCGTTCTCGT CGCCCTGATC
GGAATCAGCT TCTCGGCGTT CCAGATGTGG ATCGCCGCCC GTGGGCGCCA GTTCGGTGGA
ACGCTGCCCG TGATCGGTGA GTTCCAGATT ATCTCGCTAC AACAGTTACA GGTCAACGCG
ATCCACGTCA CGTTCGCGCT GGTGCTCGCC TTTCTGCTGT TTCCGGCAAG CGAAGGCGAC
GGGTTCGTCG CGCAGCAGCT CGGTCGGATC CCGCCAGCTG TCCGCGACCG CTTGGGCGCC
GACCACGCCG TCTCGAGGGC GATCACTCGA CTCGGGGACG GCGTCCGCTG GGCCGTCGTC
GATCCGTCAC GGGACCGAAT TACGCCGCTG GACGTCGCGA TGATCGCCCT CGCACTCTGG
CCGGCCTACT ACATCACCAC CGAGTTCGAC GAGATCCGGT CGCTCCCGAT CATCGGCCTC
GAAAACGCCA GTGCGATCCA CGAGCTGTAT CCGTGGCTCG AGCCGCTCGT GGTGCCGCTC
GCGTCCATGG GACTTCCGGT CGACTTCCCC GTCGCGTACC TCCTCGGAAT CGTCGGCATC
CTGCTGGTGC TCGAGGCGAC CAGACGAACG CTCGGCGTCG TCCTCATGGG GCTGGTCGCG
TCGTTTATCG TCTACGCCCG CTGGGGCTAC ATGATCCCCA GCGACTCGCC GATCGGCGCG
CTGGCGATTC AGGTCATCGA GTGGGACAAC ATCGTCTACA ACCTCTGGTA CACGGTCGAG
GCGGGGGTGT TCAGCACGCC CGTCAGCGTC AGCGTCCGGT TTATCTACAT CTTCATCCTC
TTCGGCGCGT TCCTCGAGAT GAGCGGTGCC GGCAAGTGGT TCATCGATCT CGCCTACTCG
ATGACCGGCA CCAGAAAGGG CGGCCCGGCG AAGGCGAGCG TCGTCTCGAG CGGGTTCATG
GGTATGCTCA GCGGCTCGTC GATCGCGAAC ACGGTGACGA CGGGCGCCTT TACGATTCCG
CTGATGAAGC GGTCGGGCTA CTCGCCCGAG TTCTCCGGCG CGGTGGAGTC GTCGGCGTCG
TCCGGCGGGC AGATCCTCCC GCCGGTCATG GGCGCCGTCG CGTTCCTCAT GGTCCAACTC
ATCGGTGAGC CGTACTCGAA CATCATTATC GCGGCCACGA TCCCCGCGTT CGCGTTCTTC
TTCGGCATGT GGGTGATGGT CCACTTCGAG GCCGTCAAAG GCGGAATCGG CGGCATCCCG
CGTGCGGAAC TCCCCGACGT CTCGGCGGCG ATCCGCACCG GCTGGTTCTA CCTCATCCCG
CTCGTTCTGC TGGTCTACTT CCTGGTCATC GCTCGGTTCT CGATCAACCG CGCGGGCTGG
TACACGATCG TCACCATCAC CGCGCTGATC GCGGTCGTCG CCGCGTACAA CGAGCGGACG
CGCCTCCCGC TGCTGGGTTC GATTGCCGCG CTCTACCTCG CCCAGGCCGC CGCCTTGGCG
AGTTACGGCG TCGGTCTCGG CGACGCGATT CAGGTTGCAC TCGGCCTCGA GTCGGCGAGC
GCGGCGTACT CGATTCGCGA CGCGGCGGTC GCCGCGGCCG CGGATCTCGG CCTCATCGCG
ATCCTCGTCA GTCTCGCGGT CATGCTCGCT CGTCCGCGAG GTGACGCGCC GTTGCTCGAA
CTCGACGAAG CGGTCGACGA CGCCGCGACC GCGACCGCGG CGTCGATCGA TCGCCCCGCG
CTCGCTCGGA ACACCGGCTA CCGGTTCGGG GCGTTCATCC TGAAATCGAT GGACTCGGGC
GCGCGTACCG CGACGACGGT CGTCGTCGCC GTCGCGGCCG CGGGCGTCGT CCCGGGAGTC
ATCAGCGTCT CCGGGCTCGG CCCGAACCTC GCGGCGCTCA TCAACACCGT CAGCGGGGGC
TCGATGCTGA TGCTGCTCGT TCTGACGGGA CTCGCGTCGA TCATCTTCGG GATGGGGATG
CCCACGACGG CCATGTACAT CATCCTGATC GCGATGCTCG GCGGCCCGAT CGAGGACATG
GGCGTTTGGC TGGTTGCGGC GCACCTCTTC GTCCTCTACT TCGGCCTGAT GGCTGACGTC
ACGCCGCCGG TCGCCGTCGC CGCCTTCGCA GGCGCGGGGG TCGCCAAGGC CGACGAGCTC
AAGACCGCGA GCATCGCGTT CCTCCTCTCG CTGAACAAGA TCCTCGTCCC CTTCGCCTTC
GTGTTCTCGC CGGGGATCGT CCTCGCGCGG AAAGTCGACG GCGAGTGGGG GCTCATCGGC
TGGAGCGACG TCGCCGATGT CGGCTTCTTC CTCCCCGAAG TCATCGTCCC CGTTATCGGG
ATGTTCGTCG GGGTGTACGC GCTCGGCGTC ACCATCATCG GCTACCAGTA CTCGGCGGTC
GACTCGACCC GGCGCGCCCT GTACGCCGTG GCGTCGATCC TGCTGATGGT TCCCGAGATC
CCGCTTCTCG TCGTCGAAGG AGCGCTCGCA CTGGCCGGGC TGTCGATCGG ACTGACCGGC
TTGTGGGTGA CCGTCTCTCT GCGGCTCCTC GGCCTCGCGA TCCTCGCCTC GCTGTCGTAT
CGCAACTATT CTCGGCTGCC TGACGAACAG TCGGACCCCG CCGCGCCCAC AGCGGGCAAC
GCCTAA
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| Protein sequence | MSIDTSGTDT VSDEQTDEVL EEIERRRTLR GPAAVLVALI GISFSAFQMW IAARGRQFGG
TLPVIGEFQI ISLQQLQVNA IHVTFALVLA FLLFPASEGD GFVAQQLGRI PPAVRDRLGA
DHAVSRAITR LGDGVRWAVV DPSRDRITPL DVAMIALALW PAYYITTEFD EIRSLPIIGL
ENASAIHELY PWLEPLVVPL ASMGLPVDFP VAYLLGIVGI LLVLEATRRT LGVVLMGLVA
SFIVYARWGY MIPSDSPIGA LAIQVIEWDN IVYNLWYTVE AGVFSTPVSV SVRFIYIFIL
FGAFLEMSGA GKWFIDLAYS MTGTRKGGPA KASVVSSGFM GMLSGSSIAN TVTTGAFTIP
LMKRSGYSPE FSGAVESSAS SGGQILPPVM GAVAFLMVQL IGEPYSNIII AATIPAFAFF
FGMWVMVHFE AVKGGIGGIP RAELPDVSAA IRTGWFYLIP LVLLVYFLVI ARFSINRAGW
YTIVTITALI AVVAAYNERT RLPLLGSIAA LYLAQAAALA SYGVGLGDAI QVALGLESAS
AAYSIRDAAV AAAADLGLIA ILVSLAVMLA RPRGDAPLLE LDEAVDDAAT ATAASIDRPA
LARNTGYRFG AFILKSMDSG ARTATTVVVA VAAAGVVPGV ISVSGLGPNL AALINTVSGG
SMLMLLVLTG LASIIFGMGM PTTAMYIILI AMLGGPIEDM GVWLVAAHLF VLYFGLMADV
TPPVAVAAFA GAGVAKADEL KTASIAFLLS LNKILVPFAF VFSPGIVLAR KVDGEWGLIG
WSDVADVGFF LPEVIVPVIG MFVGVYALGV TIIGYQYSAV DSTRRALYAV ASILLMVPEI
PLLVVEGALA LAGLSIGLTG LWVTVSLRLL GLAILASLSY RNYSRLPDEQ SDPAAPTAGN
A
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