Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Htur_0028 |
Symbol | |
ID | 8740591 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haloterrigena turkmenica DSM 5511 |
Kingdom | Archaea |
Replicon accession | NC_013743 |
Strand | - |
Start bp | 27462 |
End bp | 29603 |
Gene Length | 2142 bp |
Protein Length | 713 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 646510591 |
Product | putative phytochrome sensor protein |
Protein accession | YP_003401602 |
Protein GI | 284163323 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACGCCCC CGCCGCGATC ACGACCGCGT ACGGTGATCT ACCTCGCCGA GATCGACGCC GCGGCCCGCG ACGGCGCGGC CGCCCTCGAG CGCGTCGACT CGGGCCCACA GCGGCTGGTC CAGCCGCTGA CGACGGACGC GGTCGACAGT CTGGGCAGTT GGGCGGCCGA GGCCGACTGC GTCGTCTTCG CGGAGACGCC GACGACCGCG GCGGGAGCCA CGCTGCTCGA GGCCGTCGAG GCCTGCGGGT CGACGCCGGT GATACTCTTC TCCGAGGCCA CGTACGCGCC GTCGGCCGCG CGATCGACCG ACGGAATCGA CGGCTACGTC CGTCGAGGGA CCGACGACGC CGTCGCCCAC CTCGCGGACG AGATCGAGTG GGTCTGCGCC GGCGAGCGCG CGGCCGCGGC GACGGCGCTG CCCGCCGCAG ATTCGGACGC GGAGTCGGAC GCCGTCGAGA CGAGCGATAC CGACGACGTG GCCGATACCG GTGACGCGAC CGGACGGCCG ACCGCCGAAC TCCTCGAGTC GCTCCCCGAC GTCGCCGCCT GCGAGGAGCG CGACCGACTC TTCGAGCGCC TGGTCGCGAC CGCCGCCGAC GCTGTCGGGA CCGAGTACGG CTGGCTGTCG ACGGTCCACT TCGGCGAGTT GACGCCGCGG GCGACCACCG ACGCGGTCGC GGCCGAAGAC CTCGAGCCGA TCTCCCGAAA CGGCCTGCTC GACGAGGCGC TGCGAACCGG CGAACCGATT CGGATCGATG ACCTCGCGGC CGACGGGTGC CCGGAGGCGC CCCTCGAGGG GATGGAATCG CTGTGCTGCG TGCCGGTCGC CGACGTCGGT CTCCTCCTGC TCGCCGCCGC GGAACCGGCG GCGTTCGACG ACCGCGATCG CGACCTGCTC GCCGCGTGGG GACGAGTCGG GGCCGCCGTC CTCGAGCGCG TAGAGACCGA AACGAACCTG CGGACCGATC GCGATCGACT GCGCCAGGAA CTGGACCGCG CCGAGGAGAT TCGAGACCGA ATCGCCGCCG AGCGCGACGA ACTGGCGGCC GAGCGCGATC GCCTCGTCGC GGAACGCGAC CGCGCCCGAG CGCTGTTCGC GACCGTCCCG GAGCCGGCAG TCCACTACGA GATCGACGAC GGACAGCCGA TCGTCAGGCG CGTCAACGAC GCGTTCACCG ACGTCTTCGA CACCGGTCCG GCGGCGGTCG TCGACGAACC GCTGGACGCA GCCACCGTCC CGCCGGGGCT CGAGCACCGT CAGGCGACGC TGACAGAAGC GTTGCGGGCC GGTCAGCGCC GACAACTGGT CAGCCGGCGC GAGACCGTCG ACGGCGTCCG CGAGTTCCGC CTGGCGCTAG TTCCGCTCGA GGCGGCCGAA GCGGACGGGG CGACGGCTCA CAACCCCGAG GGGCTGATCG TCTACAGCGA CGTCACCGAC GCGAACCGCC GGGAGCGAGA GCTGGCGGCC ACCGAGGCGC GTCTCGAGTC GATCGCCGAG AGCCTCGAGA CGGACGTCCG AACGCCGCTG AACGTCGCCC GAGGGTATCT CGAACTCGCC GAGGAGACCG GCGACGCGGA GCACTTCGCT GAGGTCGAGA CGGCCCAGGA ACGGCTCCGC GAGCGCGTCG CGGAGCTGCG CGCGATCGCC CGTCGGGACC AGATGGCCAT CGAGACCGAA CCCGTCGCCG TCACCGACGT CGCGCGCCGG GCCTGGATCG CCGTCGACAG CGGCGACGCG CGGCTCGTGA CCCGCGAGGA CCGCGTCCTC GAGGCCGACA AGGCGCAGTT GCGGGAGCTG TTCGAGTACC TGCTGCGGGC GGCGGTCGAG AGCGTCGGCG CCGATGGTGA CGGGAAGGGG AGCGACGACG CCGCGGCCGG CGACGCGCCG ATCGTTACCG TCGGGGCGAC CGACGACGGG TTCGCCGTGA CCGGCCACCC CGCGGGGACC GACGTGACGC CGATCGGGCG AGAGATGATG CCCGTTCCCG GCCGGCTGAC CGCCGCCGAC GGCACCGGAT TCGGGCTCGG ACCCGTCGAA CGGATCGCCG ACGCCCACGG CTGGGACGTC GGCGTCGCCA CCGACGAGGG AGCTACGTTC GCGTTTCGCG GGATCGACCC GGTCGACGTG AGTCGTGACT GA
|
Protein sequence | MTPPPRSRPR TVIYLAEIDA AARDGAAALE RVDSGPQRLV QPLTTDAVDS LGSWAAEADC VVFAETPTTA AGATLLEAVE ACGSTPVILF SEATYAPSAA RSTDGIDGYV RRGTDDAVAH LADEIEWVCA GERAAAATAL PAADSDAESD AVETSDTDDV ADTGDATGRP TAELLESLPD VAACEERDRL FERLVATAAD AVGTEYGWLS TVHFGELTPR ATTDAVAAED LEPISRNGLL DEALRTGEPI RIDDLAADGC PEAPLEGMES LCCVPVADVG LLLLAAAEPA AFDDRDRDLL AAWGRVGAAV LERVETETNL RTDRDRLRQE LDRAEEIRDR IAAERDELAA ERDRLVAERD RARALFATVP EPAVHYEIDD GQPIVRRVND AFTDVFDTGP AAVVDEPLDA ATVPPGLEHR QATLTEALRA GQRRQLVSRR ETVDGVREFR LALVPLEAAE ADGATAHNPE GLIVYSDVTD ANRRERELAA TEARLESIAE SLETDVRTPL NVARGYLELA EETGDAEHFA EVETAQERLR ERVAELRAIA RRDQMAIETE PVAVTDVARR AWIAVDSGDA RLVTREDRVL EADKAQLREL FEYLLRAAVE SVGADGDGKG SDDAAAGDAP IVTVGATDDG FAVTGHPAGT DVTPIGREMM PVPGRLTAAD GTGFGLGPVE RIADAHGWDV GVATDEGATF AFRGIDPVDV SRD
|
| |