Gene Htur_0004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHtur_0004 
Symbol 
ID8740567 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaloterrigena turkmenica DSM 5511 
KingdomArchaea 
Replicon accessionNC_013743 
Strand
Start bp4164 
End bp5717 
Gene Length1554 bp 
Protein Length517 aa 
Translation table11 
GC content66% 
IMG OID646510567 
ProductDNA-directed DNA polymerase 
Protein accessionYP_003401578 
Protein GI284163299 
COG category[L] Replication, recombination and repair 
COG ID[COG1311] Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCACTCG AGGCGTCGGC CCGGATCGTC AGCGAACTCA CCAGCCGCGG CTACAACGCC 
GAGCGCGAGG CCGTGACCAA ACTCGCGTCG GCCGAGAACC CGCAGGCGGC CCTCGAGCGC
GTCGTCGAGG ACCTCCCCGA GGACGCGCTG GTCGTCCGGA CCGACCACGT CGACTCAACT
CTTTTGCGGG GGAACTCGAC GGGCCCGAAC GCCGACGCGG CTTCCGACTC GCCGGCCGAT
CCCGCCGTTT CGACTGGAGA CGCTACAACC GATCCACCGG CCACGGGCGG GGATGTTCCA
GTTGAAACGA AGGGGGGTGG GGGCGCCGAC CGATCGGTCG ATCCCGCGCT CCGGTCGCTC
GAGATCGCCG GCGATATGAC CGGCCAGAGC ACCGGGACTG GCGAGTACGA GGATTTCGTC
GCCGTCTTCC GGGATCGACT CGAGCGACTG GGATCGAAAC TCCGCGGGCG GGTCAACCAC
CGCCCGGCGT CGGCCATTCA GAACATGCCC GGCGGCAGCG ACGTCGCGAT GGTCGGGCTG
GTCAACGACA TCCGGTCGAC GGCCAGCGGT CACTGGCTGA TCGAACTCGA GGACGCGACC
GGAACCTTCC CGTGGCTCGT GATGAAGGAT CGAGAGTACG TCGATCTGGT CGACGAACTA
CTCTGCGACG AGGTGCTGGC GATGGAGGGG ACGCTGGCGG ACGACTCGGG GATCGCCTTC
GTCGACTCGA TGTACTTCCC CGACATCCCG CGAACGCACG AGCCGTCGAC CGCGGACCGC
CACGTCCAGG CGGCGCTGAT CAGCGACGTC CACGTCGGCA GTGACGAGTT CATGGCCGAG
GCCTGGAACC GTTTCGCCGA CTGGCTGCAC ACCGAGCAGG CCCAGCACGT CGAGTACCTC
CTGTTGGCCG GCGACATGGT CGAGGGCGTC GGCGTCTATC CCGACCAGGA CGAGGAACTC
GAGATCGTCG ACATCTACGA GCAGTACGAG GCCTTCAGCG AGCACTTAAA GAAGATCCCT
GGCGACATCG AGATCGTGAT GATTCCGGGC AACCACGACG CGGTCCGACT CGCGGAGCCC
CAGCCCGGGT TCGACGAGGA ACTGCGGGAG ATCATGTCCG CCCACGACCC ACAGATCGTG
AGCAACCCCT CGACGGTCAC CCTCGAGGGC GTCTCCGTCC TGATGTACCA CGGCGTCAGT
CTGGACGAGG TCATCGCGGA GTTGCCGGAA GAAAAAGCCA GCTACGACGA CCCGCACAAG
GCGATGTACC AGCTTCTGAA AAAGCGCCAC GTCGCCCCGC AGTTCGGGGG CCACACCCGA
CTCGCCCCCG AAGAGCGGGA CTACCTCGTG ATGGAGGAGG TCCCCGACAT CTTCCACACC
GGCCACGTCC ACAAGCTCGG CTTCGGGAAG TACCACAACG TGCTCGCCAT CAATTCGGGC
TGCTGGCAGG CCCAGACCGA CTTCCAGAAG AGCGTCAACA TTGACCCCGA CGCAGGCTAC
GCGCCCATCG TCGACCTCGA CACGCTCGAC GTGACCGTCC AGAAGTTCAG TTAG
 
Protein sequence
MPLEASARIV SELTSRGYNA EREAVTKLAS AENPQAALER VVEDLPEDAL VVRTDHVDST 
LLRGNSTGPN ADAASDSPAD PAVSTGDATT DPPATGGDVP VETKGGGGAD RSVDPALRSL
EIAGDMTGQS TGTGEYEDFV AVFRDRLERL GSKLRGRVNH RPASAIQNMP GGSDVAMVGL
VNDIRSTASG HWLIELEDAT GTFPWLVMKD REYVDLVDEL LCDEVLAMEG TLADDSGIAF
VDSMYFPDIP RTHEPSTADR HVQAALISDV HVGSDEFMAE AWNRFADWLH TEQAQHVEYL
LLAGDMVEGV GVYPDQDEEL EIVDIYEQYE AFSEHLKKIP GDIEIVMIPG NHDAVRLAEP
QPGFDEELRE IMSAHDPQIV SNPSTVTLEG VSVLMYHGVS LDEVIAELPE EKASYDDPHK
AMYQLLKKRH VAPQFGGHTR LAPEERDYLV MEEVPDIFHT GHVHKLGFGK YHNVLAINSG
CWQAQTDFQK SVNIDPDAGY APIVDLDTLD VTVQKFS