Gene Htur_0001 details

Gene Information

• Locus tag: Htur_0001
• ID: 8744406
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Haloterrigena turkmenica DSM 5511
• Kingdom: Archaea
• Replicon accession: NC_013743
• Strand: +
• Start bp: 155
• End bp: 2011
• Gene Length: 1857 bp
• Protein Length: 618 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 646510564
• Product: orc1/cdc6 family replication initiation protein
• Protein accession: YP_003401575
• Protein GI: 284163296
• COG category: [L] Replication, recombination and repair; [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG1474] Cdc6-related protein, AAA superfamily ATPase
• TIGRFAM ID: [TIGR02928] orc1/cdc6 family replication initiation protein

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCAGACG ACGATTCAGA ACGGACGAGA GCAGATGAGG TCGAGCAGGT GGATACTGAC 
GAGACCGGCG GGTTCTCGAG TTTCGACGGG TCCGAGCTCG CCGACGAGGA GCCGAGCCAG 
GGGCTGTTCG ACGACCTGCT CAGCGGCGAA CCGATCTTCG AGAACAAGGA GGTCCTGCGA 
CCGTCCTACA CGCCACACGA ACTCCCCCAT CGGAGCGATC AGATCAACAA GATGGCGACG 
ATTCTCGTCG CTGCGCTCCG CGGCGAAACG CCGTCGAACA TCCTCATCTA CGGCAAGACC 
GGAACCGGCA AGACCGCCAG CGCGAAGTTC GTCAGCAAGG AACTCGAGAG CACCTCCCAG 
AAGTACAGCG TGCCGTGTGA CGTCGAGTAC ATCAACTGCG AGGTCACCGA CACCCAGTAC 
CGCGTGCTCG CGCAGCTGGC CAACAAGTTC ATCGAGAAGA ACGAAGCCCG GATCGACGAC 
CGGATCGACG ACCTCGAGTC GCTGCTTGAG GCCGTAGACG AGTACGAGGC CACCAGCGCG 
GACGCGGACG CCGCCGTTCG ATCCGAAATC GAGGGCGACC GCGTCGACGA GGACGATCCG 
TTCGAATCGG TACTTCCGGA CGACGACGAA TCGGCTTCGA CTGGAACCGA AACCGGCCCG 
GCCTCTGACG AATCTCCACT CGAAACGGAG GGGTCTTCGA ACGAAGCAGG CGGTCCGTCG 
AACGCGGCTA TCGACGACTC GGACCCGACC AGGCGGAACG ACCCGAATCG ACTACCGGCC 
GACGGCGACG CACAACGGCC TGACGACGAC TTCAACCGCG AGGCTACCGA TCTCGACCGA 
AGCGACACTG GCTCGAGCGA CGGCCGATCC GATGACGGCT CGCCGAACCA CCCCCTCGCC 
TCGACGCCGT TCGATTCCCG GGAGGGCGTC GAGGCCGAAA TCGAGTCCCT CGAGGCGGAC 
AAGGAGTCCT TCGAGGAGGT CCCGATGACC GGCTGGCCGA CCGACCGCGT CTACAGCGTC 
TTCTTCGACG CCGTCGACTA CGACGAGCGG GTCGTCGTCA TCATGTTAGA CGAGATCGAC 
AAGCTCGTCG AGAAGAGCGG CGACGACACG CTCTACAACC TCTCGCGGAT GAACTCCGAA 
CTCGAGAACT CCCGCGTGTC GATCATCGGT ATCTCGAACG ACCTGAAGTT CACCGACTTC 
CTCGATCCAC GCGTCAAGTC CTCGCTGGGC GAGGAGGAGA TCGTCTTCCC GCCCTACGAC 
GCCAACCAGC TGCGGGATAT CTTAGAGCAC CGCTCGGAGG TCGCGTTCAA GGGCGGCGCC 
CTCTCCGAGG ACGTCATCCC GCTGTGTGCG GCCTTCGCGG CCCAGGAACA CGGAGACGCG 
CGTCGCGCGT TGGACCTCCT CCGGACCGCG GGCGAACTCG CCGAGCGCTC CCAGGCCGAG 
ACGATCGTCG AGGAACACGT CCGCGAGGCC CAGGACAAGA TCGAACTCGA CCGCGTCGTC 
GAGGTCGTTC GCACGCTGCC CACGCAGTCG AAACTCGTCC TCTTCGCGAT CATCTTACTC 
GAGAAAAACG GCGTCCACAG CATCAACACG GGCGAGGTGT TCAACATCTA CAAGCGCCTC 
TGCGAGGAGA TCGACGCCGA CGTCCTCACC CAGCGTCGCG TGACGGACCT CATCAGCGAA 
CTCGACATGC TCGGGATCGT CAACGCCGTC GTCGTCTCGA AGGGCCGCTA CGGCCGCACC 
AAGGAGATCA GCCTCTCCGT GCCGCTCGAG GAGACGGAGG CCGTCCTCCT CTCGGATTCT 
CGGCTTTCCG ATATCGACGA CGTCCAGCCG TTCGTCCAGG CGCGGTTCGA GAACTGA 

 

Protein sequence

MSDDDSERTR ADEVEQVDTD ETGGFSSFDG SELADEEPSQ GLFDDLLSGE PIFENKEVLR 
PSYTPHELPH RSDQINKMAT ILVAALRGET PSNILIYGKT GTGKTASAKF VSKELESTSQ 
KYSVPCDVEY INCEVTDTQY RVLAQLANKF IEKNEARIDD RIDDLESLLE AVDEYEATSA 
DADAAVRSEI EGDRVDEDDP FESVLPDDDE SASTGTETGP ASDESPLETE GSSNEAGGPS 
NAAIDDSDPT RRNDPNRLPA DGDAQRPDDD FNREATDLDR SDTGSSDGRS DDGSPNHPLA 
STPFDSREGV EAEIESLEAD KESFEEVPMT GWPTDRVYSV FFDAVDYDER VVVIMLDEID 
KLVEKSGDDT LYNLSRMNSE LENSRVSIIG ISNDLKFTDF LDPRVKSSLG EEEIVFPPYD 
ANQLRDILEH RSEVAFKGGA LSEDVIPLCA AFAAQEHGDA RRALDLLRTA GELAERSQAE 
TIVEEHVREA QDKIELDRVV EVVRTLPTQS KLVLFAIILL EKNGVHSINT GEVFNIYKRL 
CEEIDADVLT QRRVTDLISE LDMLGIVNAV VVSKGRYGRT KEISLSVPLE ETEAVLLSDS 
RLSDIDDVQP FVQARFEN