| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cwoe_5759 |
|---|
| Symbol | |
|---|
| ID | 8736235 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Conexibacter woesei DSM 14684 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013739 |
|---|
| Strand | - |
|---|
| Start bp | 6165984 |
|---|
| End bp | 6167408 |
|---|
| Gene Length | 1425 bp |
|---|
| Protein Length | 474 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 646506386 |
|---|
| Product | major facilitator superfamily MFS_1 |
|---|
| Protein accession | YP_003397535 |
|---|
| Protein GI | 284047195 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0996976 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.476223 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGCCG CCGACACCGC GCGGCGGAGC GGGGCGTATC GCACGATCGC GAGCCTCACG
CTCGCGTCGC TCGCCTACGC CGTCATGCAG ATGATGGTCG TGCCCGCCCT GCCGGCGATC
GAGCGCGATC TCGGCGCCGA CTCCAGCAGC GTCGCCTGGC TGATCTCCGC CTTCCTGCTC
AGCACCGCCG TCTCGACGCC CGTGCTCGGC CGGCTCGGCG ACATGTTCGG CAAGGAGCGG
ATGCTGATGA TCGTGCTGGC GGTGTTCGCC GCCGGCGGCG TGCTCGGCGC GTTCGCGACC
TCGCTGGAGA TGCTGATCGC CGCACGTGTG GTCCAGGGTC TCGGCGGCGC GATCTTCCCG
CTCGCGTTCG GGATCGCGCG CGACGCGCTG CCCGCCGACA AGCTGTCGAT GGGGATCGGG
CTGATGTCGG GCAGCTTCGG GGTCGGCGGC GGGGCCGGGC TGGTGCTCAG CGGGCTGATC
GTCGATCACG CCTCGTGGCA CGGGATCTTC TGGGTGGGAA TCGCGATCCC GCTCGCCGCG
ATCGTCTGCG TGCGCGCGTT CGTGCCCGCA TCCCCGGCGC GCACCCGCGT CCAGCTCGAC
TGGCTCGGCG CGATCCTGCT CGGCGGCGGC CTGATGCCGC TGCTGCTCGC CGTCTCGCGC
GGCCGCGCAT GGGGGTGGGG CTCCCCGGCC GTGCTCGGCC TGCTCGCCGG CGGCGCCGCG
CTGCTCGTGC TGTGGACGCT GTGGGAGCTG CGCCGGCGCG AGCCGCTGAT CGACGTGCGC
CTGCTCGCCC GCCGGCCGGT CTGGACCGTC AACGCCGCCG CGCTGTTCGT CGGCTTCGGC
ATGTATGCGA CGAGCTATCT CGTGCCCCAG CTGGTGCAGG CCGACCCGCT CCACGCCGGC
TTCGGCTTCG ACGCGAGCAC GACCGCCGCC GGCCTGTTCC TGCTGCCCGC GATGCTGGTG
GGCCTCGTCT TCGGTCCCGT GAGCGGCACG CTCGCGAGCC GCTTCGGCCC GAAGCTGCCG
CTCGTGCTGG GGACGGCGAC GATGGCGGCC GGCTTCGCGC TGCTCGCGTT CGCGCACGAC
GCGCCGTGGC ACGTCTACCT CGGCGCGCTG CTCTCCTACG GCCTCGGGCT GACGCTCGCG
CTGACCGCGA TGGCGAACCT GATCCTCGTC GGCGTGCCGC GCGCGCAGAC CGGCGAGTCG
ACGGGCATGA ACACGATGGT GCGCACGGTC GGCGGCTCGC TCGGCAGCCA GGTCGTCGCG
GCGCTCGTGC TGGCCGGCGG CGCGGCTGGC AGCGTCGCGG CGAGCGCGAG CGGCGGCGGG
CCGACCGAGC ACGGCTTCAC CGTCGCGTTC GCCGTCTGCG CCGCGCTGCT GCTGGTCGCC
ACGGCGTTGT CGGCGGCGGT GCCGTCCGCA CCGACCCGAG AGTGA
|
|---|
| Protein sequence | MAAADTARRS GAYRTIASLT LASLAYAVMQ MMVVPALPAI ERDLGADSSS VAWLISAFLL
STAVSTPVLG RLGDMFGKER MLMIVLAVFA AGGVLGAFAT SLEMLIAARV VQGLGGAIFP
LAFGIARDAL PADKLSMGIG LMSGSFGVGG GAGLVLSGLI VDHASWHGIF WVGIAIPLAA
IVCVRAFVPA SPARTRVQLD WLGAILLGGG LMPLLLAVSR GRAWGWGSPA VLGLLAGGAA
LLVLWTLWEL RRREPLIDVR LLARRPVWTV NAAALFVGFG MYATSYLVPQ LVQADPLHAG
FGFDASTTAA GLFLLPAMLV GLVFGPVSGT LASRFGPKLP LVLGTATMAA GFALLAFAHD
APWHVYLGAL LSYGLGLTLA LTAMANLILV GVPRAQTGES TGMNTMVRTV GGSLGSQVVA
ALVLAGGAAG SVAASASGGG PTEHGFTVAF AVCAALLLVA TALSAAVPSA PTRE
|
|---|
| |