Gene Cwoe_5401 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCwoe_5401 
Symbol 
ID8735875 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameConexibacter woesei DSM 14684 
KingdomBacteria 
Replicon accessionNC_013739 
Strand
Start bp5775153 
End bp5776394 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content73% 
IMG OID646506030 
Productpolysaccharide deacetylase 
Protein accessionYP_003397181 
Protein GI284046841 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0726] Predicted xylanase/chitin deacetylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCAGCC GGATCCTCCA GCTCGCGGTC CTTGCCGTGG TGACGCTCGC TTTCTCGCCA 
CTCGTCGCGT CGGCCCAGGC GCCGGGCGGA GGCCGCGGCG GAGGCGGAGG CGCCGCGCCC
GGCGGAGGCG AAGCGCCGAC GCAGCCCGAG ACGACCGCGC CGACGCCGCT GAGGCTCGAC
GCGGCGTCGC TGAAGCAGGC CGGCGACGGT CTGGAGCTGA GCTTCTCGAC GACCGAGCGC
TGGTCGCCGG CGTCGCTGCG CAACGGCAGA CGGTCGCTGT GCCTGCGGCT CGTCTTCGAG
ACGACGTCGG TCAACTCGCG TGACGTCTGC GTGCGACGCA GAGGCGCGAC GACGACGCTG
ACGCTGGCGC GCGTGCTGCG CTCCGGCGGC CACGGCCCGC TGCACGCGCT CGACGCGCGC
GTGCGCAAGC CCAGTCCGCG CTCGCTGACC GCGCGCCTCT CGCTCGCCAA GATCGGGATC
GCGGCCGGCT CCTCCGTCCG CTGGCGCGTG ATCTCGTCGA CCGACGGCTG CGACCTCGCC
GGCGGCGGCA ACTGCTTCCA GGCGCGCCCG CAGGACGGCG CCGTACTGTC GCTGGCCACG
CCCCAGCCGA TCGGCTGCAT CCCGGCCGGC CCTGCCTACG TCACGAACGG CTCGCGCGCG
AGGAAGCAGG TCGCGCTGAC GTTCGACGAC GGCCCGTCGG CGCTGACGCC GAACTTCCTC
GACGTGCTCA GAAGCAAGGG CGTGAAGGGC ACTTTCTTCA TGATCGGCCA GCAGGTCGCG
CCGAACGCGA GCCTCGTGCG ACGGATGCTC GCCGAGGGCC ACGAGCTGGC CGACCACACG
TGGAGCCACC CGAACGTCTC GGCCGGCGGC TCGTTCGCCT CCGGCCAGAT CACGTCCACC
GCGGGCGCGA TCCAGGCCGC CAGCGGCTTC CGGCCCTGCT CCTTCCGCGC GCCCGGCGGC
GCGGTCAGCC CGGCGCTGAC CGGCCTCGCG CGCGGGCTCG GCTTCACGAC CGTGCAGTGG
GACGTCGACC CGCTCGACTG GAAGACGCCC GGCAGCGACG CGATCTACTC GCGGATCGTC
GGCCGCACGC GCAACGGCTC GATCGTGCTG ATGCACGACG GCGGCGGACC CCGCTCGCAG
ACGCTCGCCG CGCTGCCGCG GATCATCGAC ACGTTGAGAG CGCGCGGCTA CCGCTTCGTG
ACGGTCGCTG ACATGCTCGG CGCCACGTTC ACGTATCGCT AG
 
Protein sequence
MLSRILQLAV LAVVTLAFSP LVASAQAPGG GRGGGGGAAP GGGEAPTQPE TTAPTPLRLD 
AASLKQAGDG LELSFSTTER WSPASLRNGR RSLCLRLVFE TTSVNSRDVC VRRRGATTTL
TLARVLRSGG HGPLHALDAR VRKPSPRSLT ARLSLAKIGI AAGSSVRWRV ISSTDGCDLA
GGGNCFQARP QDGAVLSLAT PQPIGCIPAG PAYVTNGSRA RKQVALTFDD GPSALTPNFL
DVLRSKGVKG TFFMIGQQVA PNASLVRRML AEGHELADHT WSHPNVSAGG SFASGQITST
AGAIQAASGF RPCSFRAPGG AVSPALTGLA RGLGFTTVQW DVDPLDWKTP GSDAIYSRIV
GRTRNGSIVL MHDGGGPRSQ TLAALPRIID TLRARGYRFV TVADMLGATF TYR