| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cwoe_5340 |
|---|
| Symbol | |
|---|
| ID | 8735812 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Conexibacter woesei DSM 14684 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013739 |
|---|
| Strand | - |
|---|
| Start bp | 5709242 |
|---|
| End bp | 5710384 |
|---|
| Gene Length | 1143 bp |
|---|
| Protein Length | 380 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 646505968 |
|---|
| Product | putative sugar ABC transporter, substrate- binding protein |
|---|
| Protein accession | YP_003397121 |
|---|
| Protein GI | 284046781 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG4213] ABC-type xylose transport system, periplasmic component |
|---|
| TIGRFAM ID | [TIGR02634] D-xylose ABC transporter, substrate-binding protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATCGGA GGTACGTACG CATCCTCGCG CTCATCGCGG CAGCGATCCT GAGCGTGGGC
GCACTCGCAG CATGCGGGAG CGACGACGAC GACAACAGCA CCACCGCCAG CGGCGGGGCA
GCGACCACCG GCACCACCAC CGGTGGCGGC TCGAGCGGCA AGGTCGCGCT CCTGCTCCCC
GAGAACAAGA CGGCGCGCTA CGAGTCCCAG GACCGGCCGC TGTTCGAGAG AAAGATGAGA
GAGATCTGCC CCGACTGCGA AGTGATCTAC TCCAATGCGG AGCAGGACGC TTCCAAGCAG
CAGTCTCAGG CTGAGGCGGC GATCACCAAC GGCGCGAGAG TGCTCGTGCT CGACCCGGTC
GACGGCAGAG CCGCGGCCGC GATCGCCACG CGCGCCAAGC AGTCCGACAT CGGCGTGGTC
GCCTACGACC GCGCGATCGA GAACGCCGAC ATCGATTACT ACATCTCGTT CGACAACGCC
AAGGTCGGTG AGCTGCAGGC GACGGCGCTG ATCGACAAGC TCAGAAGAGA CGGCAGAACG
AGCGGCGACC TCGTGATGAT CAACGGTGCG CCGACCGACC CGAACGCCGC GCTCTTCAAG
AGAGGCGCGC ACAGCGTCAT CGACAGAAGC GACTTCAGAG TCGGCAAGGA GTACGACACG
CCCGACTGGT CGCCTGACAG AGCGCAGACC GAGATGGAGC AGGCGATCAC CTCGCTCGGC
AGAGACGGCT TCGTCGGCGT CTACGCCGCC AACGACGGCA CCGCCGGCGG TGCGATCGCG
GCGATGAGAT CGAACGGACT CGACCCCGCG AGCCGGCCCA CCACGGGCCA GGACGCGGAG
CTTGCCGCAA TCCAGCGGAT CGTCGCCGGC GACCAGTACA TGACGATCTA CAAGGCGATC
AAGCCCGAGG CGGAGGACGC CGCGCAGCTC GCGTACGACC TGCTCAACGG CAACACCTCG
AGCGACCTCG TCAACCAGCA GGTCAACAAC GGCACGAAGG ACGTGCCGTC CGTGATTCTC
AGACCGGTCA CGGTCACGCA GGACAACATC AGAGACACCG TCGTCAGAGA CGGATTCTGG
ACGGTCGATC AGATCTGCAC CCCCGCGTAC GCGGCCGCGT GCAGAAGAAT CGGACTGCAG
TAG
|
|---|
| Protein sequence | MNRRYVRILA LIAAAILSVG ALAACGSDDD DNSTTASGGA ATTGTTTGGG SSGKVALLLP
ENKTARYESQ DRPLFERKMR EICPDCEVIY SNAEQDASKQ QSQAEAAITN GARVLVLDPV
DGRAAAAIAT RAKQSDIGVV AYDRAIENAD IDYYISFDNA KVGELQATAL IDKLRRDGRT
SGDLVMINGA PTDPNAALFK RGAHSVIDRS DFRVGKEYDT PDWSPDRAQT EMEQAITSLG
RDGFVGVYAA NDGTAGGAIA AMRSNGLDPA SRPTTGQDAE LAAIQRIVAG DQYMTIYKAI
KPEAEDAAQL AYDLLNGNTS SDLVNQQVNN GTKDVPSVIL RPVTVTQDNI RDTVVRDGFW
TVDQICTPAY AAACRRIGLQ
|
|---|
| |