| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cwoe_5338 |
|---|
| Symbol | |
|---|
| ID | 8735810 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Conexibacter woesei DSM 14684 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013739 |
|---|
| Strand | - |
|---|
| Start bp | 5707155 |
|---|
| End bp | 5708384 |
|---|
| Gene Length | 1230 bp |
|---|
| Protein Length | 409 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 646505966 |
|---|
| Product | inner-membrane translocator |
|---|
| Protein accession | YP_003397119 |
|---|
| Protein GI | 284046779 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG4214] ABC-type xylose transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGTTG CAGCCACACC CGCGACCGAG CCCGCCGCCG GAGGCGGCGG CGAGCAGCCC
AACGGCAGCC GCTTCGGCGT CGTCCAGCGC TTCGCCCAGG GCGAGCTCGG CTCGCTGCAG
GTGATCCTCG CGCTCGTCGT GATCTGGACC GTCTTCACGG TCGCGAACGA CCGCTTCCTG
ACGTCCACCA ACCTCGTCAA TCTCGCGCTC CAGATCGCCG GCATCGGCAT GATCTCGGTC
GGCGTCGTGA TGGTGCTCCT GCTCGGCGAG ATCGACCTCT CCGTCGGCAT CGTCTCCGGC
CTCTGCGCGG CCGTCATGGC CGTCCTCAAC GTCCAGCACG GCTGGGACCC CTACCTCGCG
ATCGCCGCTG CGCTCGTCGT CGGCGCCGCG ATCGGGCTGT TCCAGGGCAC GATCGTCACC
GCGCTCGGGA TCCCGTCGTT CGTCGTCACG CTCGCCGGTC TGATCGGCTG GCAGGGCGTC
CTGCTGTGGG TGCTCGGCGA CACCGGCACG GTCAACCTGA CCGACCCGAA GATCATCGGC
CTCGCCGGCA CCTTCTACAG AGGGGCGACC GCATGGGCCC TCGGCGCGAT CGTCGTGGTC
CTGTTCGCGC TCGCCTGCAT CAACGCGCGA CGCCGGCGCG TCAAGGCCGG CGTGCCCGCT
GCGACGCCGC TGCTCGTCGC GCTGCGGGTG ATCGGCGTCG CAGTGATCGT CTTCGGCGTG
ATCGCCGTGC TGACCGACGA CCGCGGCGTC CCGCTCGCGA TCCTGATCCT GATCGGCACG
GTCGTGATCT TCGACTACAT CGTGCGCCGC ACGACGTTCG GCCGGCACGT GCTCGCCGTC
GGCGGCAACG AGGAGGCGGC GCGCCGGGCC GGCATCCGCG TCAGACGGAT CCGCGTCGCC
GTCTTCATGA TCTCCAGCGT GATGGCGGCG TGCGGCGGCA TCCTGCTCGC CTCGCGCCTG
CTCGCGGTCA ACCAGGGCTC CGGCGGCAGC GACCTGCTGC TGCTCGCGAT CGCCGGCCCG
GTGATCGCCG GCACGTCGCT GTTCGGTGGC CGCGGCACCG TCTGGTCGGC GCTGCTCGGC
GCGCTCGTGA TCGGCTCGAT CTCCAACGGC ATGGACCTGC TCGCGTTCCC GTCCTCGACG
AAGAACATGG TCACCGGCGC CGTGCTGCTC GCGGCGGTCG TCGTCGACGC GCTCGCGCGG
CAGCGGCGCA GACAGATGGG ACGCGTGTAG
|
|---|
| Protein sequence | MSVAATPATE PAAGGGGEQP NGSRFGVVQR FAQGELGSLQ VILALVVIWT VFTVANDRFL
TSTNLVNLAL QIAGIGMISV GVVMVLLLGE IDLSVGIVSG LCAAVMAVLN VQHGWDPYLA
IAAALVVGAA IGLFQGTIVT ALGIPSFVVT LAGLIGWQGV LLWVLGDTGT VNLTDPKIIG
LAGTFYRGAT AWALGAIVVV LFALACINAR RRRVKAGVPA ATPLLVALRV IGVAVIVFGV
IAVLTDDRGV PLAILILIGT VVIFDYIVRR TTFGRHVLAV GGNEEAARRA GIRVRRIRVA
VFMISSVMAA CGGILLASRL LAVNQGSGGS DLLLLAIAGP VIAGTSLFGG RGTVWSALLG
ALVIGSISNG MDLLAFPSST KNMVTGAVLL AAVVVDALAR QRRRQMGRV
|
|---|
| |