Gene Cwoe_5155 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCwoe_5155 
Symbol 
ID8735621 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameConexibacter woesei DSM 14684 
KingdomBacteria 
Replicon accessionNC_013739 
Strand
Start bp5513868 
End bp5514890 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content71% 
IMG OID646505780 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_003396939 
Protein GI284046599 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGACA AGGAACTCGA GGAGCTGCGC CGGCACGGGT TCGGCATCGC CTACCGGATG 
CTCGGCAGCG TCTCGGAGGC CGAGGACGTG GCGCAGGAGG CGCTTCTGCG CCTGACGCGG
CACGAGGATT CGATCGACGA GCCGGCGGCT TGGATGACGA CGGTGGCGAC GCGGCTCGCG
ATCAACGTTC TGAAGTCGGC GCGGGCTCGT CGCGAGTCGT ATGTCGGGCC GTGGCTGCCA
GAGCCGCTGG TCGAGGATCC GGCACCCGAC CCGGCGTCGC GCGCCGAGCT GGAGGATTCG
CTGTCGCTGG CGCTGCTGGT GCTGCTGGAG CGGCTGACCC CGGTCGAGCG AGCGGCGTAT
CTGCTGCGTG AGGTGTTCGG CTACGGGTAT GCGGAGATCG CCGCCGTCAT CGAGCAGACC
GAAGTGAACT CGCGGCAGCT CGTGACGCGG GCGCGGAAGC ACATCGATGC CAGCCGCCCG
CGCTTCGACG CCGACGAGGT CGCCCGCGAC ACGTTGCTCG AACGGTTTCT CGCGGCCGCC
GAGGAGGGCG ACCTGGAGGC CTTGGAGCAG CTGCTGGCGA AGGACGCCGC TCTGTACGCC
GACGGCGGCG GCAAGGCGAT GGCGGCGCCG GAGCCGCTCT TCGGCGCCGC GCCGATCGCG
CGCTTCATGG CCGCCGTGGC ACACGGACGC TCTGCTTCCG GCGAGCTCGA GAGCCGACGG
GTGAGGGTCA ACGGCCAGCC TGGTCGCGTG GTGCGAGGCC CGGCAGAGCG GGAGCTCGGC
GAGGCCGAGC GGCTCGCGGC CGAGAACGTG CTGGCGCTCG TACTGTCCGG GGACGGTGAC
GCGACGCAGC TCGCCGCGCT CGTGCAGAGC GCCCGAGGCG CCGTCGGAGG CCAGACGGAT
CGGGCCGTTT CCCGGCAGCA GGCTGACGTG CGAGTCACGA GCGTGCTCAC GGTGGATGTC
GTCGACGGCC GGATCCAGAC GGTGCGCGTC GTGCGCAACC CCGACAAGCT CGCCCATCTC
TGA
 
Protein sequence
MDDKELEELR RHGFGIAYRM LGSVSEAEDV AQEALLRLTR HEDSIDEPAA WMTTVATRLA 
INVLKSARAR RESYVGPWLP EPLVEDPAPD PASRAELEDS LSLALLVLLE RLTPVERAAY
LLREVFGYGY AEIAAVIEQT EVNSRQLVTR ARKHIDASRP RFDADEVARD TLLERFLAAA
EEGDLEALEQ LLAKDAALYA DGGGKAMAAP EPLFGAAPIA RFMAAVAHGR SASGELESRR
VRVNGQPGRV VRGPAERELG EAERLAAENV LALVLSGDGD ATQLAALVQS ARGAVGGQTD
RAVSRQQADV RVTSVLTVDV VDGRIQTVRV VRNPDKLAHL