Gene Cwoe_5133 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCwoe_5133 
Symbol 
ID8735599 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameConexibacter woesei DSM 14684 
KingdomBacteria 
Replicon accessionNC_013739 
Strand
Start bp5494029 
End bp5494871 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content74% 
IMG OID646505758 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_003396917 
Protein GI284046577 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.4366 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCG CGGAGCGCTT CGCGCAGGCA CGCCCGCGGC TGCTGCGGCT CGCGTACAGC 
GAGCTCGGCG ACCTCGGCGA GGCGGAGGAC GTCGTCCAGG AGGCGTGGCT GCGGCTGGAG
CGCGTCGACG CGGAGACGAT CGAGAACCTC GACGGCTGGC TGACGACGGT CGTCGCCCGC
CTCGCGCTCG ATCGCCTGCG GTCCGCTCGC GCGCGCCGCG AGATGTACGT CGGCCCTTGG
CTGCCGGAGC CGGTCGTCTC GGAGGACCCG GCGGACCGCG TCACGCTCGA CGAGTCGGTC
AGCTATGCGC TGCTGACGGT GCTCGAACAG CTCTCGCCGG CGGAGCGCAC GGCGTTCGTG
CTGCACGAGG TGTTCGACGT GCCGTTCGGC GACGTCGCCG AGGTGGTCGG CCGCACGCCC
GAGGCGGTGC GGCAGCTCGC CTCGCGCGCC CGCCGCCACG TGCAGAGAGA GCGCCCGCGC
TTCGCGGCCT CGCGCGACGA GCACGATCGC GCCGTGCGGG CGTTCGCGCA GGCGGTCACC
GAGGGTGACC TCGGCGACCT CGTCGCGGTG CTCGACCCCG ACGTCGTCTG GACGTCGGAC
GGCGGCGGGC ACGCGACCGC CGCGCGCAAG CCGCTGTTCG GCTCCTCGCG CGTCGCGCGC
GCGTGGGCGG CGCTCAGCCG CAAGTCGGCG CAGGAGCCGA TCGAGACCGA GCTCAACGGG
CGGCTCGGGC TGGTGCTGCC GAGCGGCGAC GGTCAACGCG CGGCGCTCCT GTTCGTCGTC
AGCGACGGTC GCATCACGCG CATCGACGCG ATCCGCAACC CGGAGAAGCT GCGGCGCATC
TGA
 
Protein sequence
MTAAERFAQA RPRLLRLAYS ELGDLGEAED VVQEAWLRLE RVDAETIENL DGWLTTVVAR 
LALDRLRSAR ARREMYVGPW LPEPVVSEDP ADRVTLDESV SYALLTVLEQ LSPAERTAFV
LHEVFDVPFG DVAEVVGRTP EAVRQLASRA RRHVQRERPR FAASRDEHDR AVRAFAQAVT
EGDLGDLVAV LDPDVVWTSD GGGHATAARK PLFGSSRVAR AWAALSRKSA QEPIETELNG
RLGLVLPSGD GQRAALLFVV SDGRITRIDA IRNPEKLRRI