Gene Cwoe_5087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCwoe_5087 
Symbol 
ID8735553 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameConexibacter woesei DSM 14684 
KingdomBacteria 
Replicon accessionNC_013739 
Strand
Start bp5437648 
End bp5438580 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content70% 
IMG OID646505712 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_003396871 
Protein GI284046531 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.221009 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCCGAT ATCTCGCCGG CCGGGTCCTC GAGATGGTCC CGGTCGTCGT CTGCCTCAGC 
TTCGCCGCGT TCATGCTGAT CCACCTGGTG CCGGGCGACC CCGCGACTGC CAAGCTCGGC
ATTCGCGGGA CGCCCGAGCA GATCGCGGCG TTCCGTGCCC AGCTCGGGCT CGACCAGTCG
CTGCCGCAGC AGTACTGGCA CTTCATCAGC GGCGCGCTGA CGTTCGACTT CGGCGAGTCG
ATCCGCTCGC AGGAGGACGT CGGCGAGCTG ATCGGCCGGC GCCTGCAGCC GAGCTTCCTG
CTCGTCGGCT ACGCGCTGCT GATCGCGATC GTCGTCGCCG TGCCGCTGGC GACGATCGCC
GCGGTGCGGC GGCGCAGCTG GGTCGACCAG CTGATCCGCC TGCTGTCGAC GGTCGGCTTC
GTGATGCCGT CGTTCTGGCT CGCGCTGCTG CTCGTCAACC TCTTCAGCGT GCAGCTCGGC
GTCTTCCCGA CGTCGGGCTA CGGCGACACG TTCTCCGAGC ACCTGCGCAG CTTGACGCTG
CCCGCGCTGA CGATCGGGCT CGGGCTCGCG CCGCTGCTGC TGCGGCTGCT GCGCGACAGC
GAGATCGAGA CGCTGCAGAG CGAGTACGTC GGCGCGGCGC GGGCGCGCGG CCTGAGCGAG
CCGCGGGTCC TCGCCAAGCA CGTGCTGCGC AACTCGGCGA CCTCGACCGT CACGCTCCTC
GGCGTACTCG CTGGCGTGCT GCTGAGCGCG ACGGTGATCG TCGAGCAGAT CTTCGCGATC
CCCGGCCTCG GTTCTCTGCT GGTCACGTCC GTCAGATTCC GCGACTACCC CGTCGTGCAG
GCGCTGACGC TGCTGTTCGG GATCGTCGTC GTGGTCGCCG GCCTGCTCGC CGACCTCGTC
TACGCCTACC TCGACCCGCG GGTGCGGCTG TGA
 
Protein sequence
MSRYLAGRVL EMVPVVVCLS FAAFMLIHLV PGDPATAKLG IRGTPEQIAA FRAQLGLDQS 
LPQQYWHFIS GALTFDFGES IRSQEDVGEL IGRRLQPSFL LVGYALLIAI VVAVPLATIA
AVRRRSWVDQ LIRLLSTVGF VMPSFWLALL LVNLFSVQLG VFPTSGYGDT FSEHLRSLTL
PALTIGLGLA PLLLRLLRDS EIETLQSEYV GAARARGLSE PRVLAKHVLR NSATSTVTLL
GVLAGVLLSA TVIVEQIFAI PGLGSLLVTS VRFRDYPVVQ ALTLLFGIVV VVAGLLADLV
YAYLDPRVRL