| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cwoe_5032 |
|---|
| Symbol | |
|---|
| ID | 8735498 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Conexibacter woesei DSM 14684 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013739 |
|---|
| Strand | + |
|---|
| Start bp | 5364243 |
|---|
| End bp | 5365958 |
|---|
| Gene Length | 1716 bp |
|---|
| Protein Length | 571 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 78% |
|---|
| IMG OID | 646505659 |
|---|
| Product | ABC transporter, CydDC cysteine exporter (CydDC- E) family, permease/ATP-binding protein CydD |
|---|
| Protein accession | YP_003396818 |
|---|
| Protein GI | 284046478 |
|---|
| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG4988] ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components |
|---|
| TIGRFAM ID | [TIGR02857] thiol reductant ABC exporter, CydD subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.187703 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.003885 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGACCCCGC GCGAGGTCCA CCGCCGGCTG CTCGGCCTCG CCGGCGGCAC GCGCGTGCTG
CTCGGCGGCG CGGTCGCGGC GGGCCTCGCG GGCGCGGTGC TGCTCGTCGT GCAGGCGCTC
GCGCTCGCGC GGATCGTCGA CGGCGCCGCG TTCGGCGGCA AGGACCTCGC GGCGCTGCGG
CCGTTGGTCG TGACGCTCGC GCTCGCGCTC GCCGGCCGCG CGCTGCTGGC GACGCTGACC
GAATGGCTCG GGCGCCGCGC GGCCGAGCAC GCGATGGGCG CGCTGCGCCA CCGCGTCGCC
GCGCACGTGC TGGCGGCGCG CACGCCGCGC GTCGAGGACG CCCGCCGCGG CGAGCTGGCG
ACGGCCGCGG TCCACGGCGT CGACGCGCTC GCCGAGTACT ACGCGAAGGC GGTCCCGCAG
ATCGCGCTCG CGGCGGCGGT GCCCGTCGGG CTCGTCGGCG TGATCCTCTG GCACGACCCG
CTCGTCGGCG CGCTGCTGGC GGTGACGCTC CCGCTCGTCG TCGTCTTCAT GGTGCTCGTC
GGGCGCGAGT CGGCGGAGCG GATCGACGAG CGGCGGCTGG CGCTCGGGGT GCTCGGCTCG
CACTTCCTCG ACGTCGTGCG CGGCCTGCCG ACCCTGCGCG CCCACGGCCG CGCCGAGGCG
CAGGCGGAGA CGCTCGGGGC GATCGGCGAG CGCTACCGCA GCGAGTCGGT CGCCGCGCTG
CGGGTCGCGT TCCTGTCCGC GCTCGTGCTG GAGCTGATGG CGATGGTCGG GACCGCGATC
GCCGCCGCGG TCGTCGGCGT CCAGCTCGCC GGCGGCTCGC TCGGCTTCGA AGCCGGCCTG
CTCGTCCTGC TGCTCGCGCC CGAGGTCTAC GTCCCGCTCC GGCTCGCCGG CCAGCGCTAC
CACGCCGCCG AGGACGGCGC CGCCGCCGCG CAGACGCTGC TGGAACTGCT CGACGAGCCG
GTCGGCGGGA GGAGTGGAGA TCTGACCACC GTGGGCGTGG TCAATCCTCC ACTCCTCGAT
CCGCCCGACC CCGCCCGCGC CCCGCTCACG CTCCGCGGCG TGCGGGTCGA CGGCGGAGCG
GGGCGGCCGC CGGCGCTCGA CGGGCTCGAC CTGACGCTCA CGCCCGGGCG CTTGACTGCG
CTCGTCGGCG CGTCCGGTGC GGGCAAGTCG ACGCTGCTGC GACTGCTCGC CCGCCTCGCC
GAGCCGGACG AGGGGGCCGT CCTCTGCGGC GCGACCGACC TGCGCGCCGT CGCGTCCGAG
GCGTGGTGGC CGCGAATCGC CTGGCTGCCC CAGCGCGCGG CGCTGCTGCG CGGACCGTTG
GAGGAGATGC TGCGCCTGCA GTGCCCCGAC GCGCCCGGCG ACGCGCTCGC GCTGGCGCTG
CGACGGGCGG ACGCTGACGC GATCGTCGCC GCGCTGCCGG CCGGGCTCGC GACGCCGGTC
GGCGCCGGCG GCCGTGGCTT CTCCGGCGGG CAGGCGCAGC GGCTGGCGCT CGCCGGCGCG
CTGCTCTCCA CCGCTCCGCT GCTGCTGCTC GACGAGCCGA CCGCCCACCT CGACCCGGCC
AGCGCGACGA TGGTCGCCGC CGGCATCCGC GCTGCCGCCG CCGGCCGCAC CGCCATCGTC
TCGACCCACG ATCCCGCGCT CGTCGCGGTC TGCGACGAGG TCGTGGCGCT CGAAGCCGGC
CGCGTCGCGG AGCTGCTGGA AGGAGCCGCG GCGTGA
|
|---|
| Protein sequence | MTPREVHRRL LGLAGGTRVL LGGAVAAGLA GAVLLVVQAL ALARIVDGAA FGGKDLAALR
PLVVTLALAL AGRALLATLT EWLGRRAAEH AMGALRHRVA AHVLAARTPR VEDARRGELA
TAAVHGVDAL AEYYAKAVPQ IALAAAVPVG LVGVILWHDP LVGALLAVTL PLVVVFMVLV
GRESAERIDE RRLALGVLGS HFLDVVRGLP TLRAHGRAEA QAETLGAIGE RYRSESVAAL
RVAFLSALVL ELMAMVGTAI AAAVVGVQLA GGSLGFEAGL LVLLLAPEVY VPLRLAGQRY
HAAEDGAAAA QTLLELLDEP VGGRSGDLTT VGVVNPPLLD PPDPARAPLT LRGVRVDGGA
GRPPALDGLD LTLTPGRLTA LVGASGAGKS TLLRLLARLA EPDEGAVLCG ATDLRAVASE
AWWPRIAWLP QRAALLRGPL EEMLRLQCPD APGDALALAL RRADADAIVA ALPAGLATPV
GAGGRGFSGG QAQRLALAGA LLSTAPLLLL DEPTAHLDPA SATMVAAGIR AAAAGRTAIV
STHDPALVAV CDEVVALEAG RVAELLEGAA A
|
|---|
| |