Gene Cwoe_4942 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCwoe_4942 
Symbol 
ID8735408 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameConexibacter woesei DSM 14684 
KingdomBacteria 
Replicon accessionNC_013739 
Strand
Start bp5269838 
End bp5270857 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content76% 
IMG OID646505569 
ProductABC transporter related protein 
Protein accessionYP_003396728 
Protein GI284046388 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0955475 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.393607 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCGA TCGAGCTGCG CGCGCTCGTC AAGCGCTACG GCGCGCACAC GGCGCTCGGC 
GGCGAGCGCG GGATCGACCT GACCGTCGAC GACGGCGAGC TGGTCGCGAT CCTCGGCCCC
AGCGGCGCCG GCAAGACGAC GGCGCTGACG CTCGTCGCCG GCTTCGAGGA GGCGACCTCC
GGTGCGGTCG TGATCGGCGG GCGCGACGTG ACGCGGCTGC CGGCGCACAA GCGCGACGTC
GGCGTCGTCT TCCAGAGCTA CGCGCTGTTC CCGCACCTGA CGGTCGGCGA GAACGTCGCC
TTCCCGCTGC GAACGCGCCG CGTCCCTCGC GCCGAGCGGC GCGAGCGGGT CGCCAGAGCG
CTCGCGACGG TCGGCCTGCC CGGCACCGAG GAGCGCGCCC CCGCGACGCT GTCCGGCGGA
CAGCAGCAGC GGATCGCGCT CGCGCGGGCG CTCGTCTTCG AGCCGCGGAT CCTGCTGCTC
GACGAGCCGC TGGCGGCGCT CGACCGGCGA CTGCGCGACC AGATGCAGGT CGAGCTGCGC
GCGCTCCACC GCGAGCTGGG CGTGACGATG CTGCTCGTCA CGCACGACCA GGAGGAGGCG
CTGACGCTGT CGGACCGGCT CGTCGTGCTG CACGACGGGG CGATCGCGCA GGAGGGGCCG
CCGGCGGAGG TCTACCGCCG CCCGGCGAAC CGCTTCGTCG CGGAGTTCCT CGGCGCCAGC
AACCTGCTCG AACACGACGG CGGCCTGCTG CTGGTGCGGC CCGAGGACGT GCGCGTGAGC
GCGAACGGCG CGGCTGACGG GAGCGGCGGG AGCGGCGGGA GCGGCGCCGA GGACACGGGC
GTGCGGGCGC TCGTGGAGGA CAGCGTCTTC CTCGGCTCGC GCGTGGTCTG CCGCCTGCGG
ACCGAGGACG GGCGGGTGCT GCTGGCAGAG CGACCGGCGG CGGAGCAGGT CCCGGTCGCA
GGCGAGCGCG TGCGCGCGAG CTGGGACCCG GAGCGCACCG CGCTCCTGAC CGACGACTGA
 
Protein sequence
MSAIELRALV KRYGAHTALG GERGIDLTVD DGELVAILGP SGAGKTTALT LVAGFEEATS 
GAVVIGGRDV TRLPAHKRDV GVVFQSYALF PHLTVGENVA FPLRTRRVPR AERRERVARA
LATVGLPGTE ERAPATLSGG QQQRIALARA LVFEPRILLL DEPLAALDRR LRDQMQVELR
ALHRELGVTM LLVTHDQEEA LTLSDRLVVL HDGAIAQEGP PAEVYRRPAN RFVAEFLGAS
NLLEHDGGLL LVRPEDVRVS ANGAADGSGG SGGSGAEDTG VRALVEDSVF LGSRVVCRLR
TEDGRVLLAE RPAAEQVPVA GERVRASWDP ERTALLTDD