| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cwoe_4511 |
|---|
| Symbol | |
|---|
| ID | 8734975 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Conexibacter woesei DSM 14684 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013739 |
|---|
| Strand | + |
|---|
| Start bp | 4811925 |
|---|
| End bp | 4813523 |
|---|
| Gene Length | 1599 bp |
|---|
| Protein Length | 532 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 646505138 |
|---|
| Product | drug resistance transporter, EmrB/QacA subfamily |
|---|
| Protein accession | YP_003396299 |
|---|
| Protein GI | 284045959 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0561268 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGAGAACA AGAAGCTCGT GCTCGTGGCG ATGATCTTCG CGGTGGCGAT GATGTTCATC
GACCAGACGA TCGTCGCGCT CGCAGTCCCC GACCTGCAGC GAGATCTCGG CGTCTCCTCG
ACCGGGGCGC AGTGGATTAT CAACGGCTAC CTGCTGTCGC TGTCGGCGAT GTTCGCGCTC
GGCGGCAAGC TCGCCGACGT GCTCGGCCAC CGGCGGATGG TGCTCGCCGG GGTGACGGGC
TTCGCGATCT TCTCCGCACT CTGCGGCGCG ACGCCGACCG GGTCGATCGG CGAGGCGTGG
ATGATCTTCT TCCGCATCCT CCAGGGCGCC AGCGCCGCGC TGCTGTTCCC CGCCGCGCTC
GCGATCGTCG TCTCCGCCTA CCCGCTGCGC GAGCGCGGCA AGGCGCTGGC GATCTTCTTC
GCGGCCTCCG GCGGGCTGAC GGCGCTCGGG CCGCTCGCCG GCGGCTACCT GACCGAGTGG
ACGTGGCGGG CGATCTTCTG GGTCAACGTG CCGGTCGCGA TCGTCGCGAT CGTGCTGACG
CTGAAGGCGA AGCCGGCGGA GGACCGGCGC AGAGTGCCGA TCGACTTCCG CGGCGCGGTG
CTCGTCTCGA TCGCGATGGG CCTCGCCGTG CTCGGCCTGC AGCAGGCCGG CGTGTGGGGC
TGGGACGACG TGCGGACGTG GGCGTGCATC GTCGCCGGCC TGGCGCTGCT CGCCTTCTTC
GTGTTCGACC AGCTGCGGAC GAAGGACCCG CTGATCGAGA TGCGGATCTT CGCCCAGCGC
GCGTTCGCTG CGGACAACGC GGTGCTGTTC CTCATATCAG CCGTGTTCGT GCCGCTGTTC
TTCTTCGCGA GCGTCTACGC GCAGGTCTCG CTCGGCTACA GCGCGAGCGA GGCGGGACTG
TTCCTGCTCG TCTTCTTCGC CGGCTTCGCG ACCGCGTCGC AGTGGGGTGG GCGGATCCTC
GACGAGCGCG GCGCGAAGCC GTCGGTCGCG CTCGGCTGCG CGGTCGCGGC GGTCGGCTTC
TACCTGTGGG GCTCGCAACT GCCGGACCAG CAGTTCAGCA ACCAGTGGTA TTGGCTCGCG
CTCGCGGGCG CCGGGATGGG GCTGGTGCTC GGCCCGGTCA GCACCGACGC GATAAACCGC
GCGCCGCACG CGAGCTACGG CGAGGTGACC GGCGTCACGC AGACCGTCCG CAACTTCGGC
GCCAGCCTCG GGCTGGCGAT CCTCGGCTCG GTGCTGGTGA CGCAGAACGT CAACCGCGTC
GAGGACACGC TGACCGCGCG CGGGCTGCCC GCGTCGGAGG CGGACCGGCT CGCCCACGCG
ATGACGTCGT CCAGCGGCGG CGACGCGGCG AACGGGTTGT CGCAGCAGGC GGGCTCCGCC
GCGAGAGGGA TCTTCGACGC GGTCCAGCTC GACGTCGCCC AGTCGACCCA GGTCGTCGTC
TACGCGATGG CGGGGATCAT GGCCGTCGCG TTCGTGCTCG CGCGGATCGG GATGGCGAGA
GGGCGGGCCG AGGAGCCGGT CCACGACGAA GAGGAGGCCG CGGCGCTCGA CGTCGGCGGC
GGCCCGCTGT CCCAGCCGGG CCCGAGCGAG GTCAGCTAG
|
|---|
| Protein sequence | MENKKLVLVA MIFAVAMMFI DQTIVALAVP DLQRDLGVSS TGAQWIINGY LLSLSAMFAL
GGKLADVLGH RRMVLAGVTG FAIFSALCGA TPTGSIGEAW MIFFRILQGA SAALLFPAAL
AIVVSAYPLR ERGKALAIFF AASGGLTALG PLAGGYLTEW TWRAIFWVNV PVAIVAIVLT
LKAKPAEDRR RVPIDFRGAV LVSIAMGLAV LGLQQAGVWG WDDVRTWACI VAGLALLAFF
VFDQLRTKDP LIEMRIFAQR AFAADNAVLF LISAVFVPLF FFASVYAQVS LGYSASEAGL
FLLVFFAGFA TASQWGGRIL DERGAKPSVA LGCAVAAVGF YLWGSQLPDQ QFSNQWYWLA
LAGAGMGLVL GPVSTDAINR APHASYGEVT GVTQTVRNFG ASLGLAILGS VLVTQNVNRV
EDTLTARGLP ASEADRLAHA MTSSSGGDAA NGLSQQAGSA ARGIFDAVQL DVAQSTQVVV
YAMAGIMAVA FVLARIGMAR GRAEEPVHDE EEAAALDVGG GPLSQPGPSE VS
|
|---|
| |