Gene Cwoe_4287 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCwoe_4287 
Symbol 
ID8734749 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameConexibacter woesei DSM 14684 
KingdomBacteria 
Replicon accessionNC_013739 
Strand
Start bp4563041 
End bp4564984 
Gene Length1944 bp 
Protein Length647 aa 
Translation table11 
GC content68% 
IMG OID646504913 
ProductRicin B lectin 
Protein accessionYP_003396076 
Protein GI284045736 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG5520] O-Glycosyl hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.718232 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.560117 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAGTC CGAGGAGAGA GATCGTGTCC AGCAGGCCCA GGAGCGCCTG GCGCTCAGTC 
GTGCTCGCAG CCGGTGCCGC GATGGCGCTG GCGGTCGTCC CGTCGTCCGC GCTGGCGGTC
GGCGAGACGC TCAACGTCTG GCAGACCGGC GGCAGCGGAT CGAGCGGCTT GACGCCGCAG
ACCGACGTCA GACTCGGCAG TCCCGCGCGC GGGACGTACA ACGTCGAGGT CGACGACAGC
AAGGTGACGC AGACGGTCGA CGGCGGCTTC GGCGCCTCCT TCACCGACTC CTCCGCGTAC
CTGCTGATGA GACTGAAGGC GTCGAACCCG AGCGGCTACT CGACGCTGAT GAACAAGATC
TTCGGGACGG CCGCCGCGGA CGGCATCGGG CTGCGCTTCT GGCGCGTGCC GATGACCTCC
TCGGACTTCA CGGCCGCGAG ATCGCACTGG ACCTCGCGCG ACAGCTCCGG CTCGCCGTTC
GCGCTCAGCG CGCAGGACAC CGGCCGCATC ATCCCGGTGA TCAGAGACGC GCTCGCGATC
AACCCGAACC TGCGGATCAT GGCGAGCCCG TGGAGCGCGC CCGGCTGGAT GAAGTCCAAC
GGCTCGATGA TCTGCAACAC CGGCTCGGGC AACAGCACGC TGCTGCCGGC GCACTACCAG
GACTGGGCGG ACTACTTCGT CAGCTGGATC AGAGCGTACG AGTCCAACGG GATCCCGATC
TGGGGCGTCA GCGCGCAGAA CGAGCCCGGC TACTGCCCGA ACAACTACCC CGGCATGACG
TGGACGCCGG CGGCCGAGGG CGCCTGGGTC GCCAACTACC TGCGCCCGTC GCTGACGAGA
GCGGGCCTCA GCAAGCAGAT CCTCGGCTTC GACCACAACT GGGAGTTCTT CGCCAATCCG
CTCGCGCTGA TGAACGGCAG CGCGGCGAGC TTCGACGGAC TCGCGTGGCA CTGCTACGAC
AACCCCAGCG ACCCGGCCGC GATGACGAAG CTGCGGAACC TGTTCCCGAC CAAGAGCGTC
TACGAGACCG AGTGCTCGTC GGACACGACC CCGACGGACA TCATCAGATA CGGCACGGCC
GACATGACGC TGAAGTCGGT GCAGAACTGG GCGCAGGGCG TGATCACCTG GAACCTCGCG
CTCGACCAGA CGGGCGGCCC GCAGCTCGGC GGCTGCGTCG GCTGCGTCGG GCTGATCACG
ATCGACTCCG CGACGAGCGC GGTGACGCTG CGCAACAACT ACTTCCAGCT CGGTCAGATC
TCGAAGTTCG TCGCGCCCGG CGCGAGACAC ATCGCATCGA CCGTCGACGC GCACGGGATC
GTCACCGCCG CGTTCAAGAA CCCCGACGGC CAGGAGGTGC TCGTCGCCCA CAACACGAAC
GCGACGTCGA CCTCGTTCAC CGTCAGCTGG AACGGCAGAG GCTCGTTCAA CTACACGCTC
CCGTCGCGCG GCACGGTGAC CTTCCGCGGC ACGGTGCCGG CGGCGACCTC GCTGCCGGCG
ACGCCCGCCG CGGGGCGGAC GTTCAAGTTC GTCAGCCGCA CGAGCGGCAA GCCGTTCGGC
GTCTCCGGCG CCTCGACGGC GAACGGCGCG AGAGTCGTCC AGTGGCTCGA CAACAGCGAC
TGGGACCAGC AGTGGAGACT CGTCGACGCC GGCGGCGGCT ACTGGAACCT GATCAACCGC
AACAGCGGCC TCGGGCTCGA CAACGGCGGC ACCTCGACCG ACGGCGTGCA GATGCAGCAG
TGGGCGGTCG TCGGGACCGG CAACTTCAAC CAGCAGTGGC AGATCACGGC GGCCAGCTCC
GGCTATTACC GGATCGTCAA CCGCACGAGC GGCAAGTCGC TCGACGTCAG AGACGGCAGC
CTCGCCGAGG ACGCCGCGAT CCAGCAGTGG ACGACGTACA GCGGTGAGCC CAACCAGGAG
TTCCAGCTCG TCCCGACGAG CTGA
 
Protein sequence
MSSPRREIVS SRPRSAWRSV VLAAGAAMAL AVVPSSALAV GETLNVWQTG GSGSSGLTPQ 
TDVRLGSPAR GTYNVEVDDS KVTQTVDGGF GASFTDSSAY LLMRLKASNP SGYSTLMNKI
FGTAAADGIG LRFWRVPMTS SDFTAARSHW TSRDSSGSPF ALSAQDTGRI IPVIRDALAI
NPNLRIMASP WSAPGWMKSN GSMICNTGSG NSTLLPAHYQ DWADYFVSWI RAYESNGIPI
WGVSAQNEPG YCPNNYPGMT WTPAAEGAWV ANYLRPSLTR AGLSKQILGF DHNWEFFANP
LALMNGSAAS FDGLAWHCYD NPSDPAAMTK LRNLFPTKSV YETECSSDTT PTDIIRYGTA
DMTLKSVQNW AQGVITWNLA LDQTGGPQLG GCVGCVGLIT IDSATSAVTL RNNYFQLGQI
SKFVAPGARH IASTVDAHGI VTAAFKNPDG QEVLVAHNTN ATSTSFTVSW NGRGSFNYTL
PSRGTVTFRG TVPAATSLPA TPAAGRTFKF VSRTSGKPFG VSGASTANGA RVVQWLDNSD
WDQQWRLVDA GGGYWNLINR NSGLGLDNGG TSTDGVQMQQ WAVVGTGNFN QQWQITAASS
GYYRIVNRTS GKSLDVRDGS LAEDAAIQQW TTYSGEPNQE FQLVPTS