Gene Cwoe_4276 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCwoe_4276 
Symbol 
ID8734738 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameConexibacter woesei DSM 14684 
KingdomBacteria 
Replicon accessionNC_013739 
Strand
Start bp4550764 
End bp4551603 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content70% 
IMG OID646504902 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_003396065 
Protein GI284045725 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1177] ABC-type spermidine/putrescine transport system, permease component II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.704911 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCCGC GCGCATTCGG CGAACGGCTC CGCGGCGGGC TGCTCGGCCT CTGGACGACG 
CTCGTCGTCG CATATCTGTG CGTCCCCGTC GCGATCGTCG TGCTGTTCGG CTTCAACGAC
AACAGGGGCC GCTTCAACCT GACGTGGCAG GGCTTCACGC TCGACCACCT GCTGCACCCG
TTCAGCGATC CCGACCTCGC GCTCGCGCTG AAGAACTCGC TGCTGATCGC GGCGGTGACG
ACCGCGATCG CGATCGTGCT GGGGACGTGG CTGGCGCTCG CGCTCGTGCG CCACCGCTTC
CGCGGCCGCA CCGCCGCCGA GTTCTTCGTC TTCCTGCCGA TGGCGACGCC CGAGGTCGTG
ATGGGCGCCT CGCTGCTGGC GATGTTCCTC GTCGTCGGCG TCGGCACCGG CTTCGTCACG
CTCGTGATCT CGCACACGAT GTTCTGCCTC TCCTACGTCG TCGTGACGGT GCGCGCACGG
CTGGAAGGGC TCGACCGGCA CATAGAGGAG GCGGCACGCG ACCTCGGCGC CGGTCAATGG
GCGGCGTTCC GCCGCGTCAC GCTGCCGATG ATCGCGCCGG GCGTCGCCGC CGCGGCGGTG
CTGTCGGCCG CGCTCTCGAT CGACGACTAC GTCATCACCA GCTTCAACGC AGGACAGACC
CAGACGTTCC CGCTGTTCAT CTTCGGCGCG ACGCGCCAGG GCGTGCCGCC CGAGGTCAAC
GTGCTCGCCA CGCTGCTGCT CGTCGCGGTG CTCGCGCTGG TCGCGGTCAA CGTGCTGGTC
CAGCGTGCGC TCGCGCGCCG CGACCGCGGG AACGCCGATC CGATACGAGG TACCGCATGA
 
Protein sequence
MAPRAFGERL RGGLLGLWTT LVVAYLCVPV AIVVLFGFND NRGRFNLTWQ GFTLDHLLHP 
FSDPDLALAL KNSLLIAAVT TAIAIVLGTW LALALVRHRF RGRTAAEFFV FLPMATPEVV
MGASLLAMFL VVGVGTGFVT LVISHTMFCL SYVVVTVRAR LEGLDRHIEE AARDLGAGQW
AAFRRVTLPM IAPGVAAAAV LSAALSIDDY VITSFNAGQT QTFPLFIFGA TRQGVPPEVN
VLATLLLVAV LALVAVNVLV QRALARRDRG NADPIRGTA