| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cwoe_4179 |
|---|
| Symbol | |
|---|
| ID | 8734641 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Conexibacter woesei DSM 14684 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013739 |
|---|
| Strand | + |
|---|
| Start bp | 4441545 |
|---|
| End bp | 4442384 |
|---|
| Gene Length | 840 bp |
|---|
| Protein Length | 279 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 646504806 |
|---|
| Product | transcriptional activator ligand binding domain protein |
|---|
| Protein accession | YP_003395969 |
|---|
| Protein GI | 284045629 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG4978] Transcriptional regulator, effector-binding domain/component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.803381 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCCCA TGATGACCGT CGGACAGTTC GCCCGAATGA CCCGGCTGAG CGCGAAGCAG
CTGCGCAGCT GGGACGGGCT CGGCCTGCTC GCCCCCGCGC AGGTCGACCC CGACACGGGC
TACCGCTACT ACCACCCGCG TCAGGCGCGC ACCGCCGTCA CGATCGCGCT GCTGCGCTCG
CTCGACGTGC CGCTCGCGTC GATCCGCGAG CTGCTCGTCG CCGACGACGA GGGCGCCGAG
CGGCTGCTGT CCGAGCAGCG CGAGCGGCTG CAGGCCGAGC TGGTCGCGCG CGAGCGCGCG
CTGCGAGCGC TCGCGCGGCT GACCGCCGAC CGCGAGCTGA TGCCGTACGA GGTGTCGACC
GCGACCCTGC CGCCGCGGCG CCTGCTCGGC CTGCGCGGCA CGACGACCGC CGAGCGGCTC
CATCGCGACG CCGCCGCGCT GGTCGAGCAG CTGCTGCGCG CGCTGCCTTG GGCTGCCGCG
CCCGGCGCCC CGCCGCTCGT CGGGCTCTAC CCGCTCGATC TCGACGGCGA CGTCGCGTTC
GCGGTCGGCG TCGACCCGGC CGCCTCCGCC GCGCCCGAGG CGGCCGGCGC GGCCGCGTCG
CGGCCCGACG GAATCGTGCC GATCGAGCTG CCCGGCGGCG CGATCGCCCG TGTCACGCAC
GTCGGCAGCT ATGACGAGCT GCCGCTCGCC TACTTCCCCC TGCTCGCCTG GCTCCAGGAG
CGCGGCCACC CGGCCGCGGG CCCCGTGCGA GAGACGTATC TCGACGATCC CTCCGAGGTG
GAGCCGACGC GGCTGCGCAC GGAGGTCTCG ATTCCACTGA CCGATCCGGA GGACCGCTGA
|
|---|
| Protein sequence | MKPMMTVGQF ARMTRLSAKQ LRSWDGLGLL APAQVDPDTG YRYYHPRQAR TAVTIALLRS
LDVPLASIRE LLVADDEGAE RLLSEQRERL QAELVARERA LRALARLTAD RELMPYEVST
ATLPPRRLLG LRGTTTAERL HRDAAALVEQ LLRALPWAAA PGAPPLVGLY PLDLDGDVAF
AVGVDPAASA APEAAGAAAS RPDGIVPIEL PGGAIARVTH VGSYDELPLA YFPLLAWLQE
RGHPAAGPVR ETYLDDPSEV EPTRLRTEVS IPLTDPEDR
|
|---|
| |