| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cwoe_4002 |
|---|
| Symbol | |
|---|
| ID | 8734460 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Conexibacter woesei DSM 14684 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013739 |
|---|
| Strand | - |
|---|
| Start bp | 4251401 |
|---|
| End bp | 4252186 |
|---|
| Gene Length | 786 bp |
|---|
| Protein Length | 261 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 646504627 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_003395794 |
|---|
| Protein GI | 284045454 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAACCTCG ACCTCTCAGG CAAGACCGCG ATCGTCACCG GCGCGTCGCG CGGGATCGGC
CTCGCGGTCG CTCGCCAGCT CGCCGACTCC GGCGCGCACG TCGTGCTGAC GGCTCGCAAG
GCGCAGGACG CCGAGGCGGC GGCCGCCACG ATCGGCGAGC GCGCCGCCGG CTTCGGCGCG
CACGCGACCG ACGAGGCGGC CGCGACGGCC TGCGTCGCTT TCGCGATCGA GCGCTTCGGC
AGCCTCGACG TGCTCGTCAA CAACGCCGGC ACCAACCCGG CGCTCGGGCC GCTGGCGGAG
ATGGACCACG GGCGCTTCGC GAAGACGATC GACGTCAACG TGTGGGCGCC CGTGCTGTGG
ACGGGCCTCG CGTGGCGCGC CTGGATGCGC GAGCACGGCG GCGCGGTCGT CAACAACGCG
TCGCTCGGCG GGATCGTCAC CGCGCCCGAC TTCGGCGTCT ACCACGCGTC GAAGGCGGCG
CTCATGCACA TCACGCGTCA CGCGGCGGTC GAGCTGGCCC CGCGCGTGCG CGTCAACGCG
GTCGCGCCCG GCGTCGTCCG CACGCGGCTG GCGGAAGCGC TCTGGAAGGA GCAGGAGGAC
GAGATCGTGG CGCGGTTCCC GCTCGGACGC GTCGGCGAGC CGGACGACGT GGCGCGCGCC
GTGACGTTCC TGGCCAGCGA CGCGGCCGCC TGGATCACGG GCGAGACGCT GGTCGTCGAC
GGCGGCTTCG TGCTCGGCAC GGCGTCGGTC GAGGCGGTCG CGACGGCCGG GGAGGGGGCG
CGGTGA
|
|---|
| Protein sequence | MNLDLSGKTA IVTGASRGIG LAVARQLADS GAHVVLTARK AQDAEAAAAT IGERAAGFGA
HATDEAAATA CVAFAIERFG SLDVLVNNAG TNPALGPLAE MDHGRFAKTI DVNVWAPVLW
TGLAWRAWMR EHGGAVVNNA SLGGIVTAPD FGVYHASKAA LMHITRHAAV ELAPRVRVNA
VAPGVVRTRL AEALWKEQED EIVARFPLGR VGEPDDVARA VTFLASDAAA WITGETLVVD
GGFVLGTASV EAVATAGEGA R
|
|---|
| |