Gene Cwoe_3975 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCwoe_3975 
Symbol 
ID8734433 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameConexibacter woesei DSM 14684 
KingdomBacteria 
Replicon accessionNC_013739 
Strand
Start bp4216581 
End bp4217807 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content72% 
IMG OID646504600 
ProductL-carnitine dehydratase/bile acid-inducible protein F 
Protein accessionYP_003395767 
Protein GI284045427 
COG category[C] Energy production and conversion 
COG ID[COG1804] Predicted acyl-CoA transferases/carnitine dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.36423 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCTTT CTGATGTCAA ACCAACACCC GGCCCGCTCG CCGGCCTGCG CGTGCTCGAA 
CTGGGGCAGC TCCTCGCGGG TCCGTACGCC GGGCGCCTGC TCGCCGAGAT GGGCGCCGAG
GTCCTGAAGA TCGAGGCTCC GGAGCGCCCC GACCCGCTGC GCGAGTGGGG GCACGCCCGT
TACAGGGGCC GCTCGCTGTG GTGGCCGGTC CAGTCGCGCA ACAAGAAGTT CGTCACGCTC
AACCTGCGTG AGCACCGCGG GCAGGAGCTG ATGCTGGAGC TGGTGCAGCA GAGCGACGTC
GTGCTCGAGA ACTTCCGTCC CGGAACGCTC GAGCGCTGGA ACCTCGGATA CGAGCAGCTG
GCCGCCGTCA ACCCGGGGGT CGTCCTCTGC CGCGTCTCGG GCTACGGCCA GACCGGTCCC
TACGCCGGCC GCCCGGGCTA CGCGTCGGTC GCCGAGGCGA TGGGCGGCCT GCGCTACATC
TCCGGCTTCC CCGGCGAGGC GCCGCCGCGC TCGGCGATCT CGCTCGGCGA CTCGCTCGCC
GGCATCTTCG CCGCGTACGG GATCCTGCTC GCGCTGTACG AGCGCCAGGC GCGCGGCGAC
GGGATCGGTC AGGTGGTCGA CGTCTCGCTG GTCGAGGCGT GCTTCGCGTT GATGGAGGGC
GCCCTTCCGG AGTACGACCG GCTCGGGATC GTGCGCGAGC CGAACGGGAC GAGCCTCAAG
GGCGTCGCGC CGTCGAACAT CTTCCGCACC CGCGACGGCA AGTGGATGAT CATCGCCGCC
AACCAGGACA CGCTCTTCCG CCGGCTGGCG GACGCGATGG GGCGGCCGGA GCTGGCGACC
GACGAGCGCT TCGACACGCA CCTCGCGCGC GGCGCCAACC AGGAGGAGCT CGACGGGATC
ATCGCGGACT GGGCGGAGGA CTACGACGCC GCGGCGCTCG ACGCGCTGCT CGACGACGGC
GGCGTCGTCT GCGGCCCGGT CTACAGCATC GCCGACATCG CCGCGGATCC GCAGTTCGCC
GCGCGCGACA TGCTCCTGCG CCACGACGAC CCGGAGTTCG GCGAGTACGT CGGACCGGGC
GTCGTGCCGA AGCTGTCGCG CACCCCCGGC GGCGTGCGCT GGTCCGCGTC ATGGGAGCAC
GGCGAGCACA ACGACGAGGT GTACGGGGGG CTGCTCGGCC TCGCGGCCGG CGTGCGCGGC
GAGCTGCGTC GCGAGGGGGT GATCTGA
 
Protein sequence
MQLSDVKPTP GPLAGLRVLE LGQLLAGPYA GRLLAEMGAE VLKIEAPERP DPLREWGHAR 
YRGRSLWWPV QSRNKKFVTL NLREHRGQEL MLELVQQSDV VLENFRPGTL ERWNLGYEQL
AAVNPGVVLC RVSGYGQTGP YAGRPGYASV AEAMGGLRYI SGFPGEAPPR SAISLGDSLA
GIFAAYGILL ALYERQARGD GIGQVVDVSL VEACFALMEG ALPEYDRLGI VREPNGTSLK
GVAPSNIFRT RDGKWMIIAA NQDTLFRRLA DAMGRPELAT DERFDTHLAR GANQEELDGI
IADWAEDYDA AALDALLDDG GVVCGPVYSI ADIAADPQFA ARDMLLRHDD PEFGEYVGPG
VVPKLSRTPG GVRWSASWEH GEHNDEVYGG LLGLAAGVRG ELRREGVI