| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cwoe_3914 |
|---|
| Symbol | |
|---|
| ID | 8734371 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Conexibacter woesei DSM 14684 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013739 |
|---|
| Strand | + |
|---|
| Start bp | 4155014 |
|---|
| End bp | 4156030 |
|---|
| Gene Length | 1017 bp |
|---|
| Protein Length | 338 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 646504538 |
|---|
| Product | MIP family channel protein |
|---|
| Protein accession | YP_003395706 |
|---|
| Protein GI | 284045366 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0580] Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) |
|---|
| TIGRFAM ID | [TIGR00861] MIP family channel proteins |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.223328 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGCCA CACAGCCAGC GCCCAAGCCT GGCGGGACAT CGCGGTTTGG CCCCGACGCA
GCTTGGCGGC GCTCTCTCTG GGGTGACGTG CTCGGCGAGT TCGCCGGCAC ATTCATCCTC
ATTCTCCTTG GTGTCGGCTC CGTTGCGATG GCGGTAGCGG CACTTCCCGA GTCGGGACGC
GGGCAGTTCG ACACCGCCTC CTGGCTCATC ATCGCGTTTG GATGGGGTTT CGGCGTCACC
TTCGGCGTGT ACGTCGCCGG CGGCGTCACC GGAGCCCACC TCAATCCGGC GGTGACGCTC
GCGTTCGCGC TCAAGCGCGG CTTCGCGTGG GCGAAGGTCC CGTGGTACAT GCTCGCCCAG
CTCGCCGGCG CGTTCGTCGC CGCGTTCCTG CTCTACGAGC TGTACGGAGC GTCGATAGAT
TCGCTCGAAC GCGCGAGAGA CATCGTGCGC GGCACACCCG AGTCCGTCGG CACGTTCTCG
ATCTTCGCGA CCTTCCCGGC CGGCTACTTC GGCACCTGGT GGGGTCCGTT CTTCGACCAG
GTCGTCGGCA CCGCGATGCT CGTCTTCGCG ATCTTCGCGC TCGTCGACAA CGCCAACCAG
CCGCCGAAGT CGAACCTCGC GCCGGTGGTC GTCGGCTTCG TCGTCGTGGC GATCGGCCTC
TCGATCGGCG CCAACGCCGG CTACGCGATC AACCCGGCCC GCGACCTCGG CCCGCGTCTC
GTGACCTGGA TCGAAGGCTG GAAGACGATC GCGGTCCCAG GCGACTACGG CAACATCAAC
AGCTACATGT GGATCCCGAT CGTCGGACCC TTCGTCGGCG GTGCGATCGG CGCCTTCCTC
TACGACTTCT TCATCGGCGA CGTGCTGAAG TCGCGCGGCG TCCCCGAGGA CACGAGCGTC
GAGGAGGAAG GGACGACGGA GGTCGAGCAG GGCGGCCGTG GCGCGACCGC CGCCGCCGAC
GCCGGCTACG TCGCACGCGA CCGACCCGGA GACACCCCAC CCGGGAGGGC TCCGTGA
|
|---|
| Protein sequence | MSATQPAPKP GGTSRFGPDA AWRRSLWGDV LGEFAGTFIL ILLGVGSVAM AVAALPESGR
GQFDTASWLI IAFGWGFGVT FGVYVAGGVT GAHLNPAVTL AFALKRGFAW AKVPWYMLAQ
LAGAFVAAFL LYELYGASID SLERARDIVR GTPESVGTFS IFATFPAGYF GTWWGPFFDQ
VVGTAMLVFA IFALVDNANQ PPKSNLAPVV VGFVVVAIGL SIGANAGYAI NPARDLGPRL
VTWIEGWKTI AVPGDYGNIN SYMWIPIVGP FVGGAIGAFL YDFFIGDVLK SRGVPEDTSV
EEEGTTEVEQ GGRGATAAAD AGYVARDRPG DTPPGRAP
|
|---|
| |