Gene Cwoe_3883 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCwoe_3883 
Symbol 
ID8734338 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameConexibacter woesei DSM 14684 
KingdomBacteria 
Replicon accessionNC_013739 
Strand
Start bp4121218 
End bp4122258 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content70% 
IMG OID646504505 
Productperiplasmic binding protein/LacI transcriptional regulator 
Protein accessionYP_003395675 
Protein GI284045335 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1879] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.699132 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACGCC TCACGGCAGC AGGTGCCGCG ATCTTCGCGG CCGTCGCCCT GTCCGCATGC 
GGCAGCAGCG ACGACGGCGG CAGCACGACG AGCGGCGGAT CGGGCGGCGG GTCCGGCGGC
GGCGAGTCGA TCGCCTACAT CTCGCCGGTC GGCTCGCAGC CCGGTCAGCA GCAGGTCAGC
TTCGGGCTGG AGAGAGCGGC CGACACGGAG GGCTGGACGT ACAGAGTGGT CGACGCGAAC
CTGTCGCCCG ACCGCCAGGT CTCGCACGTC GACACGCTGA TCAACGAGAG AATCTCGGCG
TTCGCGAGCT GGACGCTCGA CCCGGGCGCC GTCGCCGGCG CCTACACGCG CGCCAACGAG
GCCGGGATCC CCGTGATCGG CATCAACTCC GAGGGTCCGG GCGTGACGTC GACCGTCTGG
TGGGAGGTCA ACACCTGCGA GCCGGACGGC CCGTGGCAGC GGACGGCAGA GTTCATCGCC
GAGCGCCGCC CGAGAGGCAA GGTCATCGTG ATGGGCGGTC CGCCGGCGCC GTCGATCACC
GCCAACGTCA GATGCTTCCG CGACGCCGCC GAGGCGGCCG GGCTGGAGAT CATCGACCAG
GCCGACAACG TCAGAGACGC CGCCGCGCCC GCCGCGCAGC TGGCCGACGA CCTGCTGACC
AAGCACGGCG ACGTCGACGC CTTCTGGGAC TACAACGACC AGACCGCGCT CGGCGTCTCC
TCAGCGGTCC TCAATGCCGG CAAGAGAGTC TCCGACGGCA GAGGCGAGGG GATCATGGTG
TTCGGCTCCA ACGGCGACCC GGACGGGATC CAGGCCGTCC GAGAGGGCCG CCTGACGGGC
ACGTGGGACA CCGACTCGGT CGCGACCGGC TGGGCGATGG CGCTCGCGAT GAGAGACGCA
CTCGGCAAGG CCGGCGAGAC GCTGCCGAGC AGGACGGTCA GATCTACGAT GTGGACGGCG
GACAACATCG CCGACTACGT CGACCCGAGA GACCGCGACT ACTCGTTCGA CTCGATCCCG
TTCGTCGAGG GCGGCAGCTG A
 
Protein sequence
MRRLTAAGAA IFAAVALSAC GSSDDGGSTT SGGSGGGSGG GESIAYISPV GSQPGQQQVS 
FGLERAADTE GWTYRVVDAN LSPDRQVSHV DTLINERISA FASWTLDPGA VAGAYTRANE
AGIPVIGINS EGPGVTSTVW WEVNTCEPDG PWQRTAEFIA ERRPRGKVIV MGGPPAPSIT
ANVRCFRDAA EAAGLEIIDQ ADNVRDAAAP AAQLADDLLT KHGDVDAFWD YNDQTALGVS
SAVLNAGKRV SDGRGEGIMV FGSNGDPDGI QAVREGRLTG TWDTDSVATG WAMALAMRDA
LGKAGETLPS RTVRSTMWTA DNIADYVDPR DRDYSFDSIP FVEGGS