Gene Cwoe_3855 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCwoe_3855 
Symbol 
ID8734310 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameConexibacter woesei DSM 14684 
KingdomBacteria 
Replicon accessionNC_013739 
Strand
Start bp4089727 
End bp4091145 
Gene Length1419 bp 
Protein Length472 aa 
Translation table11 
GC content74% 
IMG OID646504477 
ProductHemolysin-type calcium-binding region 
Protein accessionYP_003395647 
Protein GI284045307 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2931] RTX toxins and related Ca2+-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCACGG TCGTCCTCGC CGGGGTTGTG CTGATGCTGT CGCCGGTCGT CGCGGGCGCG 
GCGCAGGTCG GGACGACAGC GCCGTTCTGT CCGAGTCCGA GAGGTTGCGT CGATCTCGGG
AGCGTGAGCG TGGTCGCCGC GCCCGGCGAG CGCAACGTCG TCACCGTCAC GCGGGAGCTC
GGCGGGATCG TCGTCGTGCA TGACGACGGG GCGCCGCTGG TGAGCGCCGG CGACTGCTCC
CAGGTCGACT CGCACACGGT TCGCTGCCCG TACCCGAGCG TCGGCATCCT GCTCGGAGAC
GGCGACGACA GCGCACTGCT CGCGACGAAC GCCGCAGTGG ACGGCGGCCC CGGCGATGAC
CGTCTGCGCG CTGAGCGCGA GGCGGGATAC GTTTCCTTCA TAGGCGGCGA AGGCAACGAC
GTGCTCGACG CGACCGACCC CAACGCCTCG ACCCTGGACG GCGGTCCCGG CGACGACGTC
TTGAGCGGCT CGGGCGGGGA GGACGGGCTG ATCGGCGGCG CCGGGGACGA CCAGTTGTCC
GCCGCCCGCG GCAACGACTT CCTGACGCCC GGGCCCGGCG CCGACGACGT CGACGGGGGC
GCGGGCCGTG ACCTCTTCTC GCACGCCGAC CGCGGGACCA CGCCGTTGAC GTTCGCGCTC
ACGGACGGGC GCACCGGAGA GGATCCGCGC GCGGTCGGGA TCGAGGACGT CATCGGCGGT
GACGGAGCCG ACCGCATCAC CGGCGACGAC CGCCCCAACC TGATCCTCGG CAGCGGGGGG
AACGACGACC TCGCCGCGCG TGGCGGCGAC GACGAGGTCG ACGGAGACGG CGGCGCCGAC
ACACTCGACG GCGGTCCCGG AGCGGACCAC GTCTATGGTC GCCGCGCTGC ATGGCGCGGA
CCGCTCGACA GCAGCGAACG TGACGGCGCC GACCGGCTGC GCGGCGGCCC GGGGCGCGAC
GGCCTCGACG GCGGACCGGG CGCCGACCGC CTCACCTGCG ACGGCGGCTT CGACCACGTC
GCCGCCGGCG ACGGAGATCG GCTCCCCACA CCGGCCGGCA GTACCCGATC ACGCGGCAGC
GACTGCGAAC GGCTGAACTT CCGCACGAGC CGGTCACGGA CGTTCTTCTG CCTCCTGCCC
GCGAGCCTGC GCCCTGTCGG AGCGCAGCTG TGGCTGACGA ACCCCTGTCG GGGCGGCGCC
TGGCACACAC GCGCCGTCAT GCTGCGCGGC GCCGACCGGA CGCTGCTCGC CCGCGGCGTC
GCCCACCACG GCGCGCTCAA CATCCGCCTG CAACCGACCC GACGTGGCAG GCGCGTGCTG
CGGACCGGCA CCACGCGCGA GATCCTCCTC TCCGTACAGA CTGACCTGCC GCGAAACCGA
CAGCACAGGT CGGTGCGCAT CGCGATCCGC GTCGGCTGA
 
Protein sequence
MRTVVLAGVV LMLSPVVAGA AQVGTTAPFC PSPRGCVDLG SVSVVAAPGE RNVVTVTREL 
GGIVVVHDDG APLVSAGDCS QVDSHTVRCP YPSVGILLGD GDDSALLATN AAVDGGPGDD
RLRAEREAGY VSFIGGEGND VLDATDPNAS TLDGGPGDDV LSGSGGEDGL IGGAGDDQLS
AARGNDFLTP GPGADDVDGG AGRDLFSHAD RGTTPLTFAL TDGRTGEDPR AVGIEDVIGG
DGADRITGDD RPNLILGSGG NDDLAARGGD DEVDGDGGAD TLDGGPGADH VYGRRAAWRG
PLDSSERDGA DRLRGGPGRD GLDGGPGADR LTCDGGFDHV AAGDGDRLPT PAGSTRSRGS
DCERLNFRTS RSRTFFCLLP ASLRPVGAQL WLTNPCRGGA WHTRAVMLRG ADRTLLARGV
AHHGALNIRL QPTRRGRRVL RTGTTREILL SVQTDLPRNR QHRSVRIAIR VG