Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cwoe_3744 |
Symbol | |
ID | 8734199 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Conexibacter woesei DSM 14684 |
Kingdom | Bacteria |
Replicon accession | NC_013739 |
Strand | - |
Start bp | 3977588 |
End bp | 3978289 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 646504366 |
Product | pseudouridine synthase |
Protein accession | YP_003395536 |
Protein GI | 284045196 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.212732 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0135633 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCCTCG CCAAGTTCCT CGCCCACGCC GGCGTCGCCT CGCGACGCGC CTCCGAGCAG CTGATCGCCG AAGGGCGGAT CGCCGTCGGC GGCGAGATCG TGCTCGACCC GGCCCGCGAC GTCGACGCCT CCAGCGGCGT GACGTACGAC GGCGAGCCGG TCCGCGGCGA GGAGCCGCGC GTCGTCTACG CGCTGCACAA GCCGGCCGGC GTCGTCTCGA CGGCGGCCGA CACGCACGGC CGCCGCACCG TCACCGAGCT GGTCCCGCAG GGGCGGCGGC TCTACCCGGT CGGCCGGCTC GACGCCGACT CGACCGGCCT GATCCTGCTG ACCAACGACG GCGAGCTGGC GAACCGCCTG ACGCACCCGC GTTTCGAGGT GCCGAAGACC TACCGCGCGA CCGTCGGCGG CCCGCAGATC GGCGACCGCA CGCTGCGCCA GTTGCGCGAG GGCGTCCGGC TGGAGGACGG GATGACCGCG CCCGCGCGCG TCCGACGGCT CTCGGCGCAC GTGCTGGAGC TGACGATCCA CGAGGGTCGC AAGCGCCAGG TGCGGCGGAT GTGCGAAGAG GTCGGCCACC CGGTCAAGTC GCTCGTGCGG ACGCAGTTCG GGCCGCTCTC GCTCGGCGAC CTCGGCACCG GCCGCTCGCG CCGGCTGACC GCGAGAGAGG TGCGCGAGCT GGCGGAGGCG GCGAACGCGT GA
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Protein sequence | MRLAKFLAHA GVASRRASEQ LIAEGRIAVG GEIVLDPARD VDASSGVTYD GEPVRGEEPR VVYALHKPAG VVSTAADTHG RRTVTELVPQ GRRLYPVGRL DADSTGLILL TNDGELANRL THPRFEVPKT YRATVGGPQI GDRTLRQLRE GVRLEDGMTA PARVRRLSAH VLELTIHEGR KRQVRRMCEE VGHPVKSLVR TQFGPLSLGD LGTGRSRRLT AREVRELAEA ANA
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