Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cwoe_3664 |
Symbol | |
ID | 8734119 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Conexibacter woesei DSM 14684 |
Kingdom | Bacteria |
Replicon accession | NC_013739 |
Strand | - |
Start bp | 3900187 |
End bp | 3900975 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 646504286 |
Product | RNA polymerase, sigma 28 subunit, FliA/WhiG |
Protein accession | YP_003395456 |
Protein GI | 284045116 |
COG category | [K] Transcription |
COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
TIGRFAM ID | [TIGR02479] RNA polymerase sigma factor, FliA/WhiG family [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.198533 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | CTGGAAACCA ACGTCAAAGC GATCGAGCTC AAGGATCTCT GGCGCCGCTA CAAAGCGAGC GGCGACGGGC GTGCCCGTGA GCGACTGGTC GTAGCCTATT CACCGTTGGT GAAGTACGTC GCGGGCCGCA TGGCCTCCGG CTTGCCCGCC CACGTGGAAG AGGCAGATCT CATCTCCTAT GGACTGATCG GCCTGATCTC GGCGATCGAG CGTTTCGACC TCGGCCGCGA GATCAAGTTC GAGACGTACG CGATCCCCCG CATCCGCGGC GCGATCATCG ACGAGCTGCG CTCGCTCGAC TGGGTTCCCC GGTCGGTGCG CGCGAAGGCT CGCGAGATCG AGCGCGCCAA CGCGAAGCTG GAGCACAAGC TGCAGCGCGC GCCGACGGAC GAGGAGATGG CGCACGAGCT CGACATGTCG ATGGACGAGT TCCAGGACGC GCTGATCCAG ATCTCGAACT CGACGATCGC CGCGCTCGAC GAGCTGTGGA CGGTCTCGGA CGCGAGCGGC GATCAGATAT CGCTGCTGGA CACGCTCCAG GACCCGGACG CTCCGGACCC GGAGAAGATC GTCGACGCGA GCGAGCTGAA GGACCGGGTC GCCGACGCGA TCGCGCGGCT GCCCGAGCGG GAGAAGCTCG TGATCGCCCT CTACTACTAC GAGAACCTGA CGCTGCGGGA GATCGGAGAG GTGCTCGGCG TGACCGAGTC CCGCATCTCG CAGCTGCACA CGAAGGCCGT CCTGCGCCTG CGCTCCAGGC TGCAGAACGA AGACGCCGAC AACGGCTGA
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Protein sequence | METNVKAIEL KDLWRRYKAS GDGRARERLV VAYSPLVKYV AGRMASGLPA HVEEADLISY GLIGLISAIE RFDLGREIKF ETYAIPRIRG AIIDELRSLD WVPRSVRAKA REIERANAKL EHKLQRAPTD EEMAHELDMS MDEFQDALIQ ISNSTIAALD ELWTVSDASG DQISLLDTLQ DPDAPDPEKI VDASELKDRV ADAIARLPER EKLVIALYYY ENLTLREIGE VLGVTESRIS QLHTKAVLRL RSRLQNEDAD NG
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