Gene Cwoe_3546 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCwoe_3546 
Symbol 
ID8733998 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameConexibacter woesei DSM 14684 
KingdomBacteria 
Replicon accessionNC_013739 
Strand
Start bp3773977 
End bp3775587 
Gene Length1611 bp 
Protein Length536 aa 
Translation table11 
GC content71% 
IMG OID646504166 
Product2-isopropylmalate synthase/homocitrate synthase family protein 
Protein accessionYP_003395339 
Protein GI284044999 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0119] Isopropylmalate/homocitrate/citramalate synthases 
TIGRFAM ID[TIGR00977] 2-isopropylmalate synthase/homocitrate synthase family protein 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.579171 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCA TCCAGCTGTA CGACACCACC CTCCGCGACG GCATGCAGGG CGAGGGGATG 
TCGCTGTCCG CAGAGGAGAA GCTGCGCGTC GCGCACAGGC TCGACGCGCT CGGCGTCGAG
CTGATCGAGG CCGGCTTCCC CAGCTCCAAC CCGAAGGAGC TGGAGCTGTT CGAGCTGCTC
TCGCGCGAGA CGTTCGCGCA CGCGCAGATC GCGGCGTTCG GGATGACCCG CCGCCGCGAC
GCGCGCGCAG AGGACGACGC CGCGCTGCGC GTGCTGGTCG ACTCGTTCGC GCCCGTCTGC
ACGATCGTCG GCAAGACCTG GAGCCTGCAC CTGGAGAAGG TCGTCAAGGT CGACCGCGAC
GAGAACCTGC GGATGATCGA GGAGTCGGTC GCGTTCCTCG TCGCCGAGGG CAAGCGCGTC
GTCTATGACG CCGAGCACTG CTTCGACGGC TGGCACGCCG ACCGCGACTA CGCGCTGCGC
TGCCTGCGCG CGGCGGCGGA GGCCGGCGCC GAGACGGTCG TCCCGTGCGA CACCAACGGC
GCCCACCTTC CGGGCCAGAT CGCGACGGCA GTCGCCGACA TCACGGCGCA CCTCGCCGAC
ACCGGCGTGC GCATCGGGAT CCACTGCCAC GACGACGCCG GCGTCGGCGT CGCCAACTCG
CTCGCCGCGG TCGAGGCCGG CGCGACGCAC GTGCAGGGGA CGATGAACGG CTACGGCGAG
CGCTGCGGCA ACGCCAACCT CGTCTCGATC GTCCCGAACC TCCAGCTGAA GCTCGGCCAC
GACTGCATCG CGCCCGCGCA GCTCGCGACG TTGACCGAGA CCGCGCACTA CCTCGACGAG
CTGCTCAACC GCACCCCCAA CGCCGACCAG CCGTACATCG GCAAGAACGC GTTCGCGCAC
AAGGGCGGCA TGCACGTCGC CGGCGTGATG GCGGACGCGA CGACGTTCGA GCACATGGAT
CCGGCGCTCG TCGGCAACCG CCGCGAGCTG CTGATCTCCG AGCTGTCGGG CAAGGGGACG
GTCGCCGCCC GCGCGGAGGA GGCCGGGATC GCGCTCGATG ACGCCGCCGC GCGGCGGGTG
ATCGAGCGCG TCAAGGAGCT GGAGCACAGG GGCTATCACT ACGAGGCCGC CGACGGCTCG
TTCGAGCTGC TGCTGCGCAA GGAGTCGGGC GAGTACGAGC AGCTGTTCAC GCTCGAGTCG
TGGCGCGTGA TCGTCGAGCA GCGCGCCGAC GGCAAGGTCG AGACCGAGGC GACGATCAAG
ATCTGGGTCG ACGGTGAGCG CTACGTCCGC ACCGGCGAGG GCAACGGCCC GGTCCATGCG
CTCGACAACG CGCTGCGCGC CGTCCTCAGC GACACGCACC CGCACCTCGA CGACACCGGC
CTCGTCAACT TCAAGGTCCG CATCCTCGAT GAGACGAAGG GGACCGAGGC GGTCACGCGC
GTGCTGCTCG ACGCCTCCGA CGGCCACGAC GTGTGGGGTT CGATCGGCGT CTCGGAGAAC
GTCATCGCCG CCTCCTGGGA CGCGCTCGTC GACTCGCTCG AGTACGCGAC CCAGGCTGGG
CGCGAGACTG CCGCGCCCGC CGACGCCGCG ACGGAGCGCG CCTCCTCGTG A
 
Protein sequence
MTAIQLYDTT LRDGMQGEGM SLSAEEKLRV AHRLDALGVE LIEAGFPSSN PKELELFELL 
SRETFAHAQI AAFGMTRRRD ARAEDDAALR VLVDSFAPVC TIVGKTWSLH LEKVVKVDRD
ENLRMIEESV AFLVAEGKRV VYDAEHCFDG WHADRDYALR CLRAAAEAGA ETVVPCDTNG
AHLPGQIATA VADITAHLAD TGVRIGIHCH DDAGVGVANS LAAVEAGATH VQGTMNGYGE
RCGNANLVSI VPNLQLKLGH DCIAPAQLAT LTETAHYLDE LLNRTPNADQ PYIGKNAFAH
KGGMHVAGVM ADATTFEHMD PALVGNRREL LISELSGKGT VAARAEEAGI ALDDAAARRV
IERVKELEHR GYHYEAADGS FELLLRKESG EYEQLFTLES WRVIVEQRAD GKVETEATIK
IWVDGERYVR TGEGNGPVHA LDNALRAVLS DTHPHLDDTG LVNFKVRILD ETKGTEAVTR
VLLDASDGHD VWGSIGVSEN VIAASWDALV DSLEYATQAG RETAAPADAA TERASS